Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mepo2g02192 | ATGGACTCCGAAGATGATATGCACGATGCTCACGATATGGAGTCCCTTGAAGATGACGATTTCTACAGTGGTGATACGGAAGAAGGTGCGATGGATTATTATAGTGATTATGATGATGATGCTGGTGATTACTTTGATGATGCTGATAAGATTGAGTCTCGTCGACCTGAGCAAAATTTTACCATATTGAAGGAATCTGATATCCAAGTAAGACAGGAAGATGACATCGATACAGTAGCAGCTGTTCTTTCTGTATCAAGAGTTGCTGCAAGCATACTACTTCGTCACCACAATTGGAGTGTCAGTAAAGTGCATGATGCATGGTTTGCTGATGAAGAGCGAGTCCGAAAAGCGGTTGGCTTGTTGGAGAAGCCAGTTGTCCAGCATCCTAATACTAGCGAGCTAACATGTGGCATCTGTTTTGAAAACTATCCTCGCTCTGGGATTGGGATGGCTTCTTGTGGTCATCCATACTGTTTCTCATGCTGGGAAGGATATATTGGTACGTCCATCAATGATGGTCCTGGATGCTTGATGTTGAGATGTCCTGAACCCACTTGTGGTGCTGCTATTGGTCAAGATATGATTGATTTATTAGCATGTAATGAAGATAAAGAAAAGTATGCCCGTTACCTTCGTAGATCTTATATCGAAGACAATAAAAAGTCAAAGTGGTGTCCTGCCCCTGGTTGTGAATATGCAGTTACTTTTGATGCTGGAGGTGGAAATTATGATGTCTCTTGCCTCTGTTCGTATAGCTTTTGTTGGAATTGCACTGAGGAGGCTCATCGTCCAGTGGACTGTGGAACTGTGGTAAAGTGGATTATGAAAAACAGTGCAGAGTCTGAAAACATGAACTGGATACTTGCTAACTCAAAGCCATGTCCCAAGTGCAAGCGACCAATCGAAAAAAATCAAGGATGCATGCACATCACGTGCACTCCACCCTGTAAATTTGAATTTTGCTGGTTATGCCTTGGTGCATGGTCAGACCATGGTGAAAGAACTGGTGGTTTTTATGCTTGCAATCGTTATGAAGCAGCTAAGCAAGAGGGAGTGTATGATGATACTGAAAGAAGAAGAGAAATGGCGAAGAATTCATTGGAGAGATACACCCATTATTATGAGCGGTGGGCCAGCAACCAATCTTCAAGGCAGAAAGCTCTTGCAGATCTAGAACAGATGCAAAATGTTCATATTGAGAAGCTTAGTGACACGCAGTGCCAACCTGAGTCACAGCTTAAGTTCATTACGGAGGCCTGGTTGCAGATAGTTGAGTGTAGGAGAGTGCTGAAATGGACGTATGCATATGGGTACTATTTACCTGAGCATGAGGGTGCAAAAAAACAGTTCTTTGAGTATTTGCAAGGTGAAGCAGAATCTGGTCTAGAGAGACTTCATCAGTGTGCCGAAAAAGAACTACAGCAATTCCTCACTGCTGAAGGGCAATCTAAAGAATTCAACGACTTTCGTACAAAATTAGCTGGATTGACTAGCGTGACTAAAAACTACTTCGAGAATTTAGTGAGGGCTTTAGAGAACGGTCTATCCGATGTAGATGCTAATGGGGCTTCCTTCAGCAAAGCAACAAGCTCAAAAAATGCTGCAGGGAGCAGTAAGGGGAGAGCTGGGAGAGGAAAGGGAGCTTTGCGAACAAACAGAACTTCTGATGATACTCACTGGAGCTGTGAACATTGTACCTCTGTGAATCTCAAATCTGCCACCACATGCCAGATTTGCAATCAACGTCGATGA | 1755 | 0.4325 | MDSEDDMHDAHDMESLEDDDFYSGDTEEGAMDYYSDYDDDAGDYFDDADKIESRRPEQNFTILKESDIQVRQEDDIDTVAAVLSVSRVAASILLRHHNWSVSKVHDAWFADEERVRKAVGLLEKPVVQHPNTSELTCGICFENYPRSGIGMASCGHPYCFSCWEGYIGTSINDGPGCLMLRCPEPTCGAAIGQDMIDLLACNEDKEKYARYLRRSYIEDNKKSKWCPAPGCEYAVTFDAGGGNYDVSCLCSYSFCWNCTEEAHRPVDCGTVVKWIMKNSAESENMNWILANSKPCPKCKRPIEKNQGCMHITCTPPCKFEFCWLCLGAWSDHGERTGGFYACNRYEAAKQEGVYDDTERRREMAKNSLERYTHYYERWASNQSSRQKALADLEQMQNVHIEKLSDTQCQPESQLKFITEAWLQIVECRRVLKWTYAYGYYLPEHEGAKKQFFEYLQGEAESGLERLHQCAEKELQQFLTAEGQSKEFNDFRTKLAGLTSVTKNYFENLVRALENGLSDVDANGASFSKATSSKNAAGSSKGRAGRGKGALRTNRTSDDTHWSCEHCTSVNLKSATTCQICNQRR | 584 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mepo2g02192 | 584 | CDD | Rcat_RBR_ARI7-like | 291 | 345 | - | - | |
Mepo2g02192 | 584 | ProSitePatterns | Zinc finger RanBP2-type signature. | 561 | 580 | IPR001876 | - | |
Mepo2g02192 | 584 | SMART | ibrneu5 | 281 | 342 | IPR002867 | GO:0008270 | |
Mepo2g02192 | 584 | SMART | ibrneu5 | 206 | 268 | IPR002867 | GO:0008270 | |
Mepo2g02192 | 584 | MobiDBLite | consensus disorder prediction | 1 | 17 | - | - | |
Mepo2g02192 | 584 | ProSiteProfiles | Zinc finger RING-type profile. | 137 | 181 | IPR001841 | - | |
Mepo2g02192 | 584 | PANTHER | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING | 67 | 434 | IPR031127 | GO:0004842|GO:0016567 | |
Mepo2g02192 | 584 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 131 | 216 | IPR013083 | - | |
Mepo2g02192 | 584 | Gene3D | - | 264 | 519 | - | - | |
Mepo2g02192 | 584 | ProSiteProfiles | TRIAD supradomain profile. | 133 | 346 | IPR044066 | - | |
Mepo2g02192 | 584 | FunFam | RBR-type E3 ubiquitin transferase | 269 | 519 | - | - | |
Mepo2g02192 | 584 | SUPERFAMILY | RING/U-box | 287 | 335 | - | - | |
Mepo2g02192 | 584 | MobiDBLite | consensus disorder prediction | 528 | 557 | - | - | |
Mepo2g02192 | 584 | CDD | BRcat_RBR_ANKIB1 | 214 | 277 | - | - | |
Mepo2g02192 | 584 | SMART | zf_4 | 559 | 583 | IPR001876 | - | |
Mepo2g02192 | 584 | Pfam | IBR domain, a half RING-finger domain | 285 | 333 | IPR002867 | GO:0008270 | |
Mepo2g02192 | 584 | Pfam | IBR domain, a half RING-finger domain | 206 | 268 | IPR002867 | GO:0008270 | |
Mepo2g02192 | 584 | Pfam | Ariadne domain | 355 | 516 | IPR045840 | - | |
Mepo2g02192 | 584 | SUPERFAMILY | RING/U-box | 132 | 218 | - | - | |
Mepo2g02192 | 584 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Mepo2g02192 | 584 | FunFam | RBR-type E3 ubiquitin transferase | 131 | 220 | - | - | |
Mepo2g02192 | 584 | ProSiteProfiles | Zinc finger RanBP2 type profile. | 554 | 584 | IPR001876 | - | |
Mepo2g02192 | 584 | SUPERFAMILY | RING/U-box | 206 | 275 | - | - | |
Mepo2g02192 | 584 | MobiDBLite | consensus disorder prediction | 18 | 33 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mepo2g02192 | Mepo-Chr2 | 31682864 | 31690378 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mepo2g02192 | 18 | 584 | ARIADNE family | AT1G65430 | 69.512 | 0.0 | 825 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mepo2g02192 | K11968 | - | gmx:100784195 | 1036.17 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Mepo6g04020 | 6 | 52461289 | 52468327 | Mepo2g02192 | 2 | 31682864 | 31690378 | PCT |