Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02181 ATGGAGGAAATCAACAACCCAGGAATGAAAGTATCTTCAATCAGCAGTTGGTTAAAAGATTTGGAAATGGACGAATACAATATATTTGCTGAGGAATGCAACCTTAATTTCCTTGATGTTGATGTAGGAGGGTTTCTTTCACAAGACATAGCTAATGTATTTCAAGAACAAAACAAACAACAATGCTTGTCTTTGGGGTCCACTTCCACAAATGGTCTCAGCAAGTCGTTTGATAATAGTGACAAAATCAATGAATCTTTTTCACCAAATATTTCTCCATCTTTTCAGTTGCAAATTCCATCTTTTGAGAACTCCCCAAATTCACCCCCTAGTAACTCAAAAGAGAATGAAGCAATACTAGTGTCTCCAACCGAATTGGAAAATATGAATCACTCACCAGAAACCTCAAAAGGACCATTGGAAAATGGAAAGTTGGAAACAAAAAACTCAAAAAGCAAAAGGCCTCGTGCTCATGGTAAGGATCACATCATGGCTGAGAGAAATCGAAGAGAGAAACTCACCCAGAGCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAAAAGATGGACAAGCTATCTGTACTAATTGACACAATCAAATACATGAAAGAGCTTAAAAATCGTTTGGAAGTTGTAGAAGAACAAAACAAGAAAACAAAAAAAAAGTCATCGACGAAACCATGTCTATGCAGCGATGAAGATTCGTCATCATGTGAGGATAACATTGAATGTGTTGTTGGTTCACCATTTCAAGTGGAAGCAAAAGTGTTAGGAAAACAAGTGTTGATTCGGTTCCAATGCAAGGAGCACAAGGGGCTACTGGTTAAAATTATGGTCGAAATTCAAAAATTTCAACTCTTTGTTGTCAATAGCAGTGTCTTACCCTTTGGAGATTCTACACTCGATATTACCATCGTTGCTCAGTTGGGTGAAGGGTACAACTTGAGCATAAAGGAACTTGTGAAGAAAGTACGCATGGCATTATTGAAGTTTACGTCATCATAA 1008 0.376 MEEINNPGMKVSSISSWLKDLEMDEYNIFAEECNLNFLDVDVGGFLSQDIANVFQEQNKQQCLSLGSTSTNGLSKSFDNSDKINESFSPNISPSFQLQIPSFENSPNSPPSNSKENEAILVSPTELENMNHSPETSKGPLENGKLETKNSKSKRPRAHGKDHIMAERNRREKLTQSFIALAALVPNLKKMDKLSVLIDTIKYMKELKNRLEVVEEQNKKTKKKSSTKPCLCSDEDSSSCEDNIECVVGSPFQVEAKVLGKQVLIRFQCKEHKGLLVKIMVEIQKFQLFVVNSSVLPFGDSTLDITIVAQLGEGYNLSIKELVKKVRMALLKFTSS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02181 335 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 157 206 IPR011598 GO:0046983
Mepo2g02181 335 MobiDBLite consensus disorder prediction 65 161 - -
Mepo2g02181 335 MobiDBLite consensus disorder prediction 65 143 - -
Mepo2g02181 335 Coils Coil 196 223 - -
Mepo2g02181 335 PANTHER BHLH TRANSCRIPTION FACTOR 55 331 - -
Mepo2g02181 335 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 162 222 IPR036638 GO:0046983
Mepo2g02181 335 Gene3D - 145 224 IPR036638 GO:0046983
Mepo2g02181 335 SMART finulus 163 212 IPR011598 GO:0046983
Mepo2g02181 335 Pfam Helix-loop-helix DNA-binding domain 162 206 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02181 Mepo-Chr2 31534883 31537247 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02181 154 332 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 45.161 2.14e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02181 HLH 1.6e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02181 - - mtr:25492647 488.804