Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02177 ATGGAGGAAATCAACAACCCAGCAATGAAAGTATCATCAATCAGCAGCTGGTTAACTGATTTGGAAATGGACGAATACAATATATTTGCTGAGGAATGCAACCTTAATTTCCTTGATGCTGATGTAGGAGGGTTTCTTTCACAAGACATATCTAATGTATTTCAAGAACAAAACAAACAACAATGTTTGTCTTTGGGGTCCACTTCCACACATGGTCTCAGCAAGTCGTTTGATAATAGTGACAAAATCAATGAATCTCTTTCACCAAATATTTCTCCATCACCATCTAACTCCTCTTTTCAGTTTCAAATACCATCTTTTGATAACCCCCTAAATTCAACCCCTAGTAACTCAAAAGAGAATGAAACAATATCAATGTCTCCAACCGAATTGGAAAATATGAATCATTCAACCGAAACCTCAAAAGGGTCGGTGGAAAATGAAAACATGGAAACAAAAACCTCAAAAAGCAAAAGGCCCCGTACTCATGGTAGGGATCACATCATGGCTGAGAGAAATCGAAGAGAGAAACTCACCCAGACCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTTAAAAAGATGGACAAGCTATCTGTACTAGTTGACACTATTAAATACATGAAAGAGCTTAAAAATCGTTTGGAAGTTGTGGAAGAACAGAACAAGAAAGCAAAAAAAAGGTCATCGACCAAACCATGCCTATGCAGCGATGAAGATTCTTCATCATGTGATGATAGTGTTGAATGTGTTGTTGGTTCACCATTTCAAGTGGAAGCAAGAGTGTTAGGAAAACAAATGTTGATTCGGATCCAATGTCAAGAGCACAAGGGGCTTTTGGTTAAAATAATGGTAGAAATTCAAAGATTTCAACTATTTGTTGTCAATAGCAGTGTCTTACCCTTTGGAGATTCCACACTCGACATTACCATAATTGCTCAGTTGGGTGAAGGGTACAACTTGAGCACAAAGGAACTTGTGAAGAACGTACGCATGACAATATTGAAGTTTATTGGTGAGACTTACGTTACCCTTTCATAA 1041 0.3794 MEEINNPAMKVSSISSWLTDLEMDEYNIFAEECNLNFLDADVGGFLSQDISNVFQEQNKQQCLSLGSTSTHGLSKSFDNSDKINESLSPNISPSPSNSSFQFQIPSFDNPLNSTPSNSKENETISMSPTELENMNHSTETSKGSVENENMETKTSKSKRPRTHGRDHIMAERNRREKLTQTFIALAALVPNLKKMDKLSVLVDTIKYMKELKNRLEVVEEQNKKAKKRSSTKPCLCSDEDSSSCDDSVECVVGSPFQVEARVLGKQMLIRIQCQEHKGLLVKIMVEIQRFQLFVVNSSVLPFGDSTLDITIIAQLGEGYNLSTKELVKNVRMTILKFIGETYVTLS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02177 346 Coils Coil 201 228 - -
Mepo2g02177 346 SMART finulus 168 217 IPR011598 GO:0046983
Mepo2g02177 346 MobiDBLite consensus disorder prediction 65 148 - -
Mepo2g02177 346 MobiDBLite consensus disorder prediction 65 164 - -
Mepo2g02177 346 Gene3D - 147 228 IPR036638 GO:0046983
Mepo2g02177 346 PANTHER BHLH TRANSCRIPTION FACTOR 51 336 - -
Mepo2g02177 346 Pfam Helix-loop-helix DNA-binding domain 167 211 IPR011598 GO:0046983
Mepo2g02177 346 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 162 211 IPR011598 GO:0046983
Mepo2g02177 346 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 166 227 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02177 Mepo-Chr2 31457348 31460885 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02177 159 338 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 44.385 6.82e-40 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02177 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02177 - - mtr:25492647 504.597