Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02166 ATGGCTCCGAGGAGGACCTCAAGAGGTAAACAAAAAAGAGAAATGAAGAAGATTGAGAGAGAAAGCGATCTTTTAGTAGCATTTTCAAAGAGAAAGTCTGGCATTTACAACAAAGCCTCTGAATTATCAACACTTTGTGGGGCTTTGGTTGATATTCTTATGATTTCTCCAACAGGAAAACCATATTGTTATGGAGAACCTTCTTCTCAATCCATAGAAAGAACAATTTTGAAGAATGAAAACCCTTCGGTAGAAGAAGAATTAAAGAAACTAAAGATTAACGAAGTTAACACAAAAAATGATGAGCTTTTGGATAAAAAGCATGTTGCGGAAGCACAACGGGAAAGTTTGAAGGCTTTGGAAAGTTATGGCTATTGGTCGATCAATGAGGAAGATGTTGAAAGCTTTGATTATGATCAATTAAAAAAATTGGACACATCTTTAGTGGACATTGCAAATAAATTGATAAGTAGTGTCTTAAGCAATGGAGGAGAGATTAATCATCGTGCAATTTCTTGCATAGACGAACTGAATGGAGTCCACACAAATCCTCCTTATGTCTTTGGGGCCAGCAACAACGGTTATGAAATTGGTGCAACTCGTAGATCCCACATTTTTTATCCAAAAGGAAAAGGCAAGGATGTTATTGCTTCTCTTGAAGGTACAAAATAA 672 0.3631 MAPRRTSRGKQKREMKKIERESDLLVAFSKRKSGIYNKASELSTLCGALVDILMISPTGKPYCYGEPSSQSIERTILKNENPSVEEELKKLKINEVNTKNDELLDKKHVAEAQRESLKALESYGYWSINEEDVESFDYDQLKKLDTSLVDIANKLISSVLSNGGEINHRAISCIDELNGVHTNPPYVFGASNNGYEIGATRRSHIFYPKGKGKDVIASLEGTK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02166 223 ProSiteProfiles MADS-box domain profile. 8 68 IPR002100 GO:0003677|GO:0046983
Mepo2g02166 223 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 17 64 IPR002100 GO:0003677|GO:0046983
Mepo2g02166 223 SUPERFAMILY SRF-like 9 78 IPR036879 GO:0003677|GO:0046983
Mepo2g02166 223 PRINTS MADS domain signature 45 66 IPR002100 GO:0003677|GO:0046983
Mepo2g02166 223 PRINTS MADS domain signature 10 30 IPR002100 GO:0003677|GO:0046983
Mepo2g02166 223 PRINTS MADS domain signature 30 45 IPR002100 GO:0003677|GO:0046983
Mepo2g02166 223 PANTHER MADS BOX PROTEIN 10 152 - -
Mepo2g02166 223 Gene3D - 21 90 IPR036879 GO:0003677|GO:0046983
Mepo2g02166 223 Coils Coil 74 120 - -
Mepo2g02166 223 SMART madsneu2 8 67 IPR002100 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02166 Mepo-Chr2 31279753 31280812 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02166 5 156 Type I MADS-box Gene Family AT4G36590 34.132 1.19e-21 88.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo2g02166 SRF-TF 3.9e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02166 - K12412 mtr:11435223 130.568