Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02158 ATGGAGTCAGATCTTCAGCAGCATCCAACTATGTTTCTAGATCATCAAAATCATCATCATCAACAACAAATGAATTCAGGGTTAACACGTTTTAAATCTGCTCCAAGTTCATATTTTTCGAATATCATTGATAAAGAGTTTTATGAGCATCTTTTCAATAGACCTTCAAGTCCTGAAACAGAAAGAGTTTTTGCAAGGTTTATGAATAGTCTTAGTGGAAGTGGTGGCAGTGGTGGTGGTGGTGGTGATGCTGAAAGCGTTTCAGTTACAGCTTCTATAGCTCCTATAACTGATTCAGTAGTTGATTCATTGACTCAGAATCTATCAACAGTTCAACAGCAACAGCTTCCTATAGTGAAGGAAGAGATTGATCAACAATCTCAAACTATGCAAACAATGAATAATAATGAATCTGTGGAACTTCAACAACTTCAAAGACAACAAAGTAATAATATGAGTAATTATGGTTCTTCTGTTGCTCCTCAGAGTTTTTACCAAAGTTCTGGAAGACCACCTTTGCCGAATCAAATGAAGACCGGTCGGTCTAGTCTTATTAGACATGGTAGTTCACCTGCTGGATTGTTTTCAAACATTAACATTGATACTGGTTTTGCTGCTTTGAGAGGAATAGGAACTATGGGAGCAGCTAATAGCACTAGCAAAGAAGCAAATTTTTCTTCTTCTGCGGTACGGTTAAAGAATGCTCCAAACTATGCCTCAGCGTTAGGAGCTGAAATTGGGAGTAATAGCATTCCACAAAACAATCTTGAACCTGAAGGTTTTGCTGAAACCCGGGGTAATGATTTTATCCCGGGTTTCCCCTTAGGTACTACATGGGAGGATACTGCGATGATATCTGACAATATTACTGGCCTAAAAAGATACAGAGATGATGATGATGTAAAACCATTTCCTCCAGGTTTAAATCCAGCTGAAACTAAGAATGAAACAGGTGGCCAGACTACTTCTGCTCCTTTGGCTCATCAGATGAGTATGCCAAATACTACGGCCGAATTGGCAGCCATTGAGAAGTTTTTGCAGTTCTCAGATTCTGTTCCGTGCAAAATTCGTGCTAAACGTGGCTGTGCCACTCACCCAAGAAGTATTGCAGAAAGGGTTAGAAGAACTAAAATCAGCGAGCGAATGAGGAAACTACAGGATCTCGTGCCAAACATGGATAAGCAAACAAACACATCAGACATGTTGGACTTGGCTGTTGAGTACATTAAAGACCTACAAACCCAAGTTGAGACTCTTTCAGACAATCGAGCTAAGTGCACGTGTTCACACAAGCAACAGCAATAA 1305 0.3985 MESDLQQHPTMFLDHQNHHHQQQMNSGLTRFKSAPSSYFSNIIDKEFYEHLFNRPSSPETERVFARFMNSLSGSGGSGGGGGDAESVSVTASIAPITDSVVDSLTQNLSTVQQQQLPIVKEEIDQQSQTMQTMNNNESVELQQLQRQQSNNMSNYGSSVAPQSFYQSSGRPPLPNQMKTGRSSLIRHGSSPAGLFSNINIDTGFAALRGIGTMGAANSTSKEANFSSSAVRLKNAPNYASALGAEIGSNSIPQNNLEPEGFAETRGNDFIPGFPLGTTWEDTAMISDNITGLKRYRDDDDVKPFPPGLNPAETKNETGGQTTSAPLAHQMSMPNTTAELAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTSDMLDLAVEYIKDLQTQVETLSDNRAKCTCSHKQQQ 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02158 434 MobiDBLite consensus disorder prediction 142 172 - -
Mepo2g02158 434 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 362 412 IPR011598 GO:0046983
Mepo2g02158 434 MobiDBLite consensus disorder prediction 296 322 - -
Mepo2g02158 434 Gene3D - 363 434 IPR036638 GO:0046983
Mepo2g02158 434 FunFam Transcription factor bHLH130 family 363 432 - -
Mepo2g02158 434 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 365 425 IPR036638 GO:0046983
Mepo2g02158 434 Pfam Helix-loop-helix DNA-binding domain 367 413 IPR011598 GO:0046983
Mepo2g02158 434 SMART finulus 368 418 IPR011598 GO:0046983
Mepo2g02158 434 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 42 431 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02158 Mepo-Chr2 31159200 31163567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02158 1 429 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 40.000 1.22e-76 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo2g02158 HLH 8.5e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02158 - - gmx:100803833 542.732