Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02136 ATGGAACATGAAAAGACCGAATGTCAAGCTCCCCCTGAAGGTCCTATATTGTGCATCAACAACTGTGGATTTTTCGGAAGTGCAGCTACCATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAGCAGGCCCAGCTTGCAGCATCATCCCTTGGAAATATTATGAATGGGTCTACAAGCAACCCTGAAAAAGAACCTGTCGTTACTGCCGCCAGCGTGAATATCCCAGCCTTTTCCGTGGAACCTAAAACTGCCAGCGTTGATATCCCAGCCATTTCCGTGGAACATGAAACTATCTCTAAGCCTTTTTTATTTGGCTCAGGTTCAGAGGAGAGTGGTGATCCAAAGCCGAAGGATGGTCCGAAACGTTGCAGCAACTGCAATAAGCGAGTTGGTTTGACTGGGTTTAATTGTCGATGTGGCAACCTTTTCTGTGCTGTACATCGCTACTCAGACAAGCATGATTGCCCGTTTGATTACCGCACTTCTGCACGAGATGCCATAGCCAAAGCAAACCCGGTTGTCAAGGCTGAGAAGCTTGATAAGATCTGA 564 0.4681 MEHEKTECQAPPEGPILCINNCGFFGSAATMNMCSKCHKDMMLKQEQAQLAASSLGNIMNGSTSNPEKEPVVTAASVNIPAFSVEPKTASVDIPAISVEHETISKPFLFGSGSEESGDPKPKDGPKRCSNCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCPFDYRTSARDAIAKANPVVKAEKLDKI 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02136 187 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Mepo2g02136 187 SMART AN1_Zf_4 128 165 IPR000058 GO:0008270
Mepo2g02136 187 MobiDBLite consensus disorder prediction 107 127 - -
Mepo2g02136 187 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Mepo2g02136 187 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 53 - -
Mepo2g02136 187 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Mepo2g02136 187 Gene3D - 110 183 IPR035896 -
Mepo2g02136 187 ProSiteProfiles Zinc finger AN1-type profile. 122 168 IPR000058 GO:0008270
Mepo2g02136 187 PANTHER AN1-TYPE ZINC FINGER PROTEIN 13 187 - -
Mepo2g02136 187 SUPERFAMILY AN1-like Zinc finger 113 182 IPR035896 -
Mepo2g02136 187 Gene3D - 1 67 - -
Mepo2g02136 187 FunFam Zinc finger AN1-type containing 6 104 183 - -
Mepo2g02136 187 Pfam AN1-like Zinc finger 128 164 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02136 Mepo-Chr2 30910975 30914311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02136 4 187 C2H2 Transcription Factor Family AT3G52800 40.217 7.74e-36 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02136 - - mtr:11414450 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02136 2 30910975 30914311 Mepo2g02136 2 30910975 30914311 ECH
Mepo4g02005 4 26203233 26205742 Mepo2g02136 2 30910975 30914311 ECH