Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02123 ATGAGGAAGCCAGAGGTTGCATCTGGAAAAAACAACACAAACAATAAGCTTAGAAAAGGATTGTGGTCACCAGAGGAAGATGAGAAGCTAATGAACTACATGTTAAATAGTGGACAAGGTTGTTGGAGTGATGTTGCTAGAAATGCTGGATTGCAAAGATGTGGAAAAAGTTGTAGGCTAAGATGGATCAATTACTTGAGGCCTGATCTTAAACGTGGTGCATTCTCACCACAGGAAGAAGAACATATCATCCATTTGCATTCCCTTCTTGGAAACAGATGGTCTCAAATTGCGGCGCGCTTACCTGGAAGAACAGACAATGAAATCAAGAACTTTTGGAATTCAACAATAAAGAAAAGACTCAAGAACATGTCGTCGAACACTTCACCAAACGCAAGCGATGAATCCTCGTACGACCCTAACAAAGACCATAACATGGGAGGTTTTATAACTTCTTCAACACAAGATCATCAGCATATTGATAATAACTTTATGCCTATGTTCAATACTTCATCTCCATCACCACCAACAATGCAAAACACAGTTTTCAATACTATCATGTCAGGTTCTGGGTGTGGATTCTTCAATAATAGTACTACAGGAACATACTTGTCACAGAATAATCATGACAGCAAAAGTTTCTATTTGGAAAAAGTGTTTGGGAGTGTAAATATCATTAATGGTGTAGAAGGGGATGAGATGGAAATTTACAATGTTCCTCCTCTAGAGAGTGTTAATAGTACTATTACTTCTGAACATAGTGTAAAAATGGAGAATGCATGCAATGGAGAAGATGGTAATTACAATAGTAGTTATAACTTTGATGACATAAACAACATTGTTATTAACAACTGCAATGTTAGTAAGAGATGTGAAAATAGAGCTGATGATGAGGTGGAAAATTTATTTCATGGAGATTTATCTGTTGGAGATTGGGATTTGGAAGACTTGATGAAAGATGCTTCATCATTTCCATTTCTTGATTTTTCAAACTAA 996 0.3645 MRKPEVASGKNNTNNKLRKGLWSPEEDEKLMNYMLNSGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEEHIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNMSSNTSPNASDESSYDPNKDHNMGGFITSSTQDHQHIDNNFMPMFNTSSPSPPTMQNTVFNTIMSGSGCGFFNNSTTGTYLSQNNHDSKSFYLEKVFGSVNIINGVEGDEMEIYNVPPLESVNSTITSEHSVKMENACNGEDGNYNSSYNFDDINNIVINNCNVSKRCENRADDEVENLFHGDLSVGDWDLEDLMKDASSFPFLDFSN 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02123 331 SUPERFAMILY Homeodomain-like 17 113 IPR009057 -
Mepo2g02123 331 Gene3D - 16 72 - -
Mepo2g02123 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Mepo2g02123 331 CDD SANT 22 66 IPR001005 -
Mepo2g02123 331 Gene3D - 74 146 - -
Mepo2g02123 331 Pfam Myb-like DNA-binding domain 72 115 IPR001005 -
Mepo2g02123 331 Pfam Myb-like DNA-binding domain 19 66 IPR001005 -
Mepo2g02123 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 14 66 IPR017930 -
Mepo2g02123 331 PANTHER MYB DOMAIN PROTEIN 55 12 257 - -
Mepo2g02123 331 FunFam MYB transcription factor 16 72 - -
Mepo2g02123 331 FunFam Transcription factor MYB46 73 143 - -
Mepo2g02123 331 SMART sant 18 68 IPR001005 -
Mepo2g02123 331 SMART sant 71 119 IPR001005 -
Mepo2g02123 331 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
Mepo2g02123 331 MobiDBLite consensus disorder prediction 1 21 - -
Mepo2g02123 331 MobiDBLite consensus disorder prediction 123 156 - -
Mepo2g02123 331 CDD SANT 74 114 IPR001005 -
Mepo2g02123 331 ProSiteProfiles Myb-like domain profile. 14 66 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02123 Mepo-Chr2 30712057 30715290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02123 3 329 MYB Transcription Factor Family AT3G08500 47.278 1.55e-78 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g02123 Myb_DNA-binding 4.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02123 K09422 - gmx:100786151 418.698