Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02101 ATGGAGTCTGATCAACATGATAAAGGTGGTGATGATCAAGATGCAAAACAAGTGAACCTTAGATCTTATGAGTGCAATTTTTGCAAGAGAGGATTCTCTAATGCACAAGCTCTTGGTGGACACATGAATATCCATAGGAAAGATAAAGCAAAGCTCAAACAACAATCTTCAACAAATTACCAAACTCAATTACCATCTAATTTGGAGGGAAGTTCTAGTGAAGAGCTCAACAAATTATTACCAAACTTGAATTCTAATATTGTGTCTCAACAAGCACCTTCTAGAAGTGATGAAATTCTTGTAACTCAAGTGAGACAACAACTTCCACTTTTTGCTGAATCACCAACTAGAAATGAAATACAAATTAATCCACAAGGTCAAGTTCAAAGGGAAATTATTACTACACAAGTTGCTCAAGATTCTTCATCGGAGTTAGACCTTGAACTAAGATTAGGGCCTGAGCCACATGATTCATCAAAGCCAACGGGTACCAGAAAATTCTTTTAA 507 0.3609 MESDQHDKGGDDQDAKQVNLRSYECNFCKRGFSNAQALGGHMNIHRKDKAKLKQQSSTNYQTQLPSNLEGSSSEELNKLLPNLNSNIVSQQAPSRSDEILVTQVRQQLPLFAESPTRNEIQINPQGQVQREIITTQVAQDSSSELDLELRLGPEPHDSSKPTGTRKFF 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02101 168 PANTHER OS07G0101800 PROTEIN 9 155 - -
Mepo2g02101 168 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
Mepo2g02101 168 SUPERFAMILY beta-beta-alpha zinc fingers 21 50 IPR036236 -
Mepo2g02101 168 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Mepo2g02101 168 Gene3D Classic Zinc Finger 12 78 - -
Mepo2g02101 168 MobiDBLite consensus disorder prediction 54 73 - -
Mepo2g02101 168 MobiDBLite consensus disorder prediction 48 73 - -
Mepo2g02101 168 Pfam C2H2-type zinc finger 23 47 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02101 Mepo-Chr2 30509329 30510015 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02101 21 164 C2H2 Transcription Factor Family AT3G53820 34.868 3.74e-19 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g02101 zf-C2H2_6 1.4e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02101 - - tpra:123918605 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02101 2 30509329 30510015 Mepo2g02101 2 30509329 30510015 ECH