Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02090 ATGAGTTTTGCTTTTCGAGGGAGTAGGGGAGATATTGAAAACGGATTTTCAGAGTATGTTCCTGAGAGAACCTCAATGCGGGTTCGTCCATCTCGGCCAGTCCATAGCAATTGTCTAGTTTTTCTTTTTGCAGTTATCATGATATTCGTGATATTATACTCCCCTCAGATGTTATATTATTTTTTGCGCTGGATAATACTGTCGGTCTTTGTGATGGTTACAAGTCTGAGAGCGTATGCAATTTACCTACATCTTCAAGCACAGGCCAGGGCTCATGCTGCAGCAGCCTCTGGGTTGCTTGGCCATGCTGAATTACGACTTCACGTGCCACCATCTATTGCATTTGCAACAGGAGGAAGATTGCAGGGACTTAGACTCCAGCTTGCACTTCTTGACCGAGATTTTAATGAGATAGATTATGACACTTTGAGAGTTATTGCTTTTGGTACTCGTTCAATGACTGAGGAGGAGATAAATGCCTTGCCTATTCACAAACATAGAGTTACTGGCCCAATAAAAGATGGCTCCACCGGTTCGACATCCTCTTCTTCAGAGGCAGCCGAGATTAAACAAGATTTCAAAGGAGAAGAGGGAAGTGCCAATGATCAAGAAGATGGGTTGACTTGTGCTATATGCTTGGACCAAGTTCAGACGGGGGAACTTGTGCGTAGCTTGCCATGCTTGCATCAGTTTCATGCCAACTGCATCGATCAATGGCTCCGGCGAAAACGAACATGTCCTGTATGCAAATTTAAGATGGGGGCGGGATGGCTAAGTAACAATGCGTGCGAGTCGGATGATTCAAATATTGTGTAG 816 0.4449 MSFAFRGSRGDIENGFSEYVPERTSMRVRPSRPVHSNCLVFLFAVIMIFVILYSPQMLYYFLRWIILSVFVMVTSLRAYAIYLHLQAQARAHAAAASGLLGHAELRLHVPPSIAFATGGRLQGLRLQLALLDRDFNEIDYDTLRVIAFGTRSMTEEEINALPIHKHRVTGPIKDGSTGSTSSSSEAAEIKQDFKGEEGSANDQEDGLTCAICLDQVQTGELVRSLPCLHQFHANCIDQWLRRKRTCPVCKFKMGAGWLSNNACESDDSNIV 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02090 271 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 255 IPR013083 -
Mepo2g02090 271 SUPERFAMILY RING/U-box 202 253 - -
Mepo2g02090 271 SMART ring_2 209 249 IPR001841 -
Mepo2g02090 271 Pfam Ring finger domain 208 250 IPR001841 -
Mepo2g02090 271 PANTHER TARGET OF ERK KINASE MPK-1 1 255 - -
Mepo2g02090 271 SMART ringv_2 208 250 IPR011016 GO:0008270
Mepo2g02090 271 MobiDBLite consensus disorder prediction 169 201 - -
Mepo2g02090 271 ProSiteProfiles Zinc finger RING-type profile. 209 250 IPR001841 -
Mepo2g02090 271 MobiDBLite consensus disorder prediction 173 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02090 Mepo-Chr2 30390803 30393567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02090 1 271 C3H Transcription Factor Family AT3G55530 57.091 2.54e-102 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02090 K16283 - gmx:100805406 327.405