Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02075 ATGGTTCTGCATTTGATTAGGAAGATAAATCCGGATGTTTTCGCTCTGTCTATTATTAATGGATCATATAATTCACCTTTCTTTGCTACAAGGTTTAGGGAGGCACTGTTTAATTTTTCTGCTATTTATGATATGTTGGATGCCGTCATACCGAAGGGAAGTGAATGGAGGAGGATGCTTGAGAGGGAAATTATGGGTAGGGAAGTTATGAATGTTGTAGCATGTGAAGGTTTAGAAAGAGTTGAGAGGCCTGAGACATATAAACAATGGCAGGTTAGGAATACAAGAGCTGGTTTCAAGCAGCTTCCATTGGACTCACAATTAATGGAGAAATTTAGGACTAAGTTAAGGCAATGGTACCATAGAGATTTTGTATTTGATGAAGACAGCAAATGGATGCTTCAAGGTTGGAAGGGTCGTATTTTATATGCTTCAACTTGTTGCTTGCCGGCATAA 456 0.3882 MVLHLIRKINPDVFALSIINGSYNSPFFATRFREALFNFSAIYDMLDAVIPKGSEWRRMLEREIMGREVMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLDSQLMEKFRTKLRQWYHRDFVFDEDSKWMLQGWKGRILYASTCCLPA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02075 151 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 143 IPR005202 -
Mepo2g02075 151 ProSiteProfiles GRAS family profile. 1 149 IPR005202 -
Mepo2g02075 151 Pfam GRAS domain family 2 146 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02075 Mepo-Chr2 30134786 30135241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02075 3 151 GRAS Transcription Factor Family AT1G07520 60.000 3.04e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo2g02075 GRAS 4.7e-40 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02075 - - tpra:123918580 275.789
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03949 6 51819006 51821711 Mepo2g02075 2 30134786 30135241 PCT
Mepo2g02075 2 30134786 30135241 Mepo6g03947 6 51801178 51805245 PCT