Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02074 ATGGATCCAAACTTTCCTCAAGCTAGTGATTTCACTAACCACTTTGGTCAAGAAGGGAGTATAGTGGTCTCTGAGTTTGATCCAAATCAATATGATAGCTTCCTTGATGCTGATCCAAATGAATATGATAGCTTCCTTGATGCTGATCCAAATCAATATGATAGCTTTCTTGGTGTTGATCCACTTGGTTTTGCAGCCACCACCTTCCCTATAGAAGGTTACATGGCCTCGGTGACAGATCCTTCCCTGGAAGACACTGATTTTTCAGATACCGGTAAGTTCATAAACCAAATCCTGATGGAAGAAAATGTTGACCAGAGACCGTTCTATGACCCACTTAGCTTACAAATGACAGAAAAATCATTCTATGATGCTCTTTTACACACAAATAAACCTCTTTCCCCTAATCAACACCCCTTAGATATTCATAACTCTGATGGCACAACCAGCAGCAACAGCAATAGCAATAGCAGCGTCGAGGATTCTCGAGAGTTAAAACCCCTTTCACCTGATACCCCGGTTTCGGATCATGTTAATCATGTTTTTCAGTTTAATTCCCCTGCTATATCTCAACCTCATTCGGGTGTTAGTAATGGACTCAGAGATTTGGATTCTTCTATTACGCAGATGGCACAAAACATTTTCAGTGATGTAGATTCTGTTTCCCTATTCAAGAAAAGTTTAGAAGAAGCCAACAAATTTCTTCCTCCGCAGCCTCAACTCTTGACTGGTTTTGAGTCATCCAATTTGGATATGGCTAGGGAGGAAGAGGATCCGTTTGTGTTGAAGGGTAGAAAGAATCACAAGCGCGAAGAAAGTTTTAGTCAAGAACAAGAAGAAGAAGCTTGGAGAAGTAGCAAGCAATCAGCTATTAGTGCTGTTGATGAGGATGAGTTATCAGAGATGTTTGATAAGGTTTTGCTTAATGTGGAACATTTGCCACTATGCAATGAAAATGATTGCTTGCAGAATGGACAAGTGAAAACGGAGGAGTCACCTCCATCAAATGGAGGGAAGACTCGTCGTAAGAAACAAGGCAAGAATGAAACAATAGATTTGAGGAATCTTCTGCTTATGTGTTCACAATCTGTATATGCCAATGACAACAGGAATGCTAATGAGCTACTGAAGCAGATTAGGCAACATTCTTCACCCTCTGGGGATGGACCACAGAGGTTGGCTCATTACTTTGCCAATGGCCTTGAGGCACGCCTTGTCGGTGATGGTACTGGAGCACAAACATTCCATTCCTCTCCGAACACCAAGAGGATCTCTACTGCTGAGTTTTTGAAAGCATATCAAGTTCATCTATCTACTAGTCCTTTCAAAAAGTTTGCATACTTCTTTGCAAATAAAATGATTATGAAAGCTTCTGCAAATGCTGAAACCCTCCATATCATTGATTTTGGTATCCTATATGGTTTTCAGTGGCCAATACTTATAAAGTTTTTATCAGATAGAGAAGGTGGACCTCCAAACCTGAAGATCACTGGGATAGAGTTCCCTTTACCTGGTTTTCGTCCAATGGAAAGAATCGAAGAAACTGGTCGTCGTCTTGCCGACTATTGCAAGCGCTTCCATGTACCCTTTGAGTTTAATGCCATACCATCGCGTTATTGGGAAACAATTCGAGTTGAGGATCTTAAAATCAAGAGCAATGAGGTTGTTGTTGTGAACTCTTTGATGAGATTTAAGAATTTATTGGATGAAAGTATTGAAGCGAACAGTCCTAGAAACGCGGTTCTGCATTTAATCAGAGAGATAAATCCTGCTATTTTTGTTCAGTCAATTGTTAATGGATCATATAATTCACCATTCTTTGCTACACGGTTTAGGGAGGCTCTGTTTCATTTTTCTGCTCTTTATGATATGTTTGACACTGTCATACCACGCGAAAACAAATACAGGATGCTGATGGAGAGGGAAAGTATCGGTAGAGAAGCTATGAACGTTGTAGCTTGTGAAGGTTTAGAGAGAGTTGAGAGGCCTGAGACATATAAACAGTGGCAGGTTAGGAATACAAGAGCTGGTTTCAAGCAGCTTCCATTGAATTCGGAATTAATGGACAAATTTAGGACAAAGTTACAGCAATGTTACCACAAAGACTTTGTTTTTGATGTAGACAACAATTGGATGCTTCAAGGTTGGAAAGGACGCATTTTATATGCTTCCACGTGTTGGGTGCCAGCATAA 2193 0.404 MDPNFPQASDFTNHFGQEGSIVVSEFDPNQYDSFLDADPNEYDSFLDADPNQYDSFLGVDPLGFAATTFPIEGYMASVTDPSLEDTDFSDTGKFINQILMEENVDQRPFYDPLSLQMTEKSFYDALLHTNKPLSPNQHPLDIHNSDGTTSSNSNSNSSVEDSRELKPLSPDTPVSDHVNHVFQFNSPAISQPHSGVSNGLRDLDSSITQMAQNIFSDVDSVSLFKKSLEEANKFLPPQPQLLTGFESSNLDMAREEEDPFVLKGRKNHKREESFSQEQEEEAWRSSKQSAISAVDEDELSEMFDKVLLNVEHLPLCNENDCLQNGQVKTEESPPSNGGKTRRKKQGKNETIDLRNLLLMCSQSVYANDNRNANELLKQIRQHSSPSGDGPQRLAHYFANGLEARLVGDGTGAQTFHSSPNTKRISTAEFLKAYQVHLSTSPFKKFAYFFANKMIMKASANAETLHIIDFGILYGFQWPILIKFLSDREGGPPNLKITGIEFPLPGFRPMERIEETGRRLADYCKRFHVPFEFNAIPSRYWETIRVEDLKIKSNEVVVVNSLMRFKNLLDESIEANSPRNAVLHLIREINPAIFVQSIVNGSYNSPFFATRFREALFHFSALYDMFDTVIPRENKYRMLMERESIGREAMNVVACEGLERVERPETYKQWQVRNTRAGFKQLPLNSELMDKFRTKLQQCYHKDFVFDVDNNWMLQGWKGRILYASTCWVPA 730
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02074 730 ProSiteProfiles GRAS family profile. 344 728 IPR005202 -
Mepo2g02074 730 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 278 723 IPR005202 -
Mepo2g02074 730 MobiDBLite consensus disorder prediction 264 289 - -
Mepo2g02074 730 Pfam GRAS domain family 353 727 IPR005202 -
Mepo2g02074 730 MobiDBLite consensus disorder prediction 264 284 - -
Mepo2g02074 730 MobiDBLite consensus disorder prediction 324 348 - -
Mepo2g02074 730 MobiDBLite consensus disorder prediction 133 178 - -
Mepo2g02074 730 MobiDBLite consensus disorder prediction 133 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02074 Mepo-Chr2 30128834 30131481 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02074 93 730 GRAS Transcription Factor Family AT1G07530 47.646 0.0 580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo2g02074 GRAS 1.2e-110 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02074 - - lja:Lj0g3v0300259.1 903.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02074 2 30128834 30131481 Mepo2g02074 2 30128834 30131481 ECH
Mepo6g03947 6 51801178 51805245 Mepo2g02074 2 30128834 30131481 PCT