Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02062 ATGAAGTGCTTCCATTTCTCAAACGGATCATCCGAAAAACGAACCACAGAAGAAAACGATGAAGGTTCAGGTTCAGCTTCAGCATCAAGCTCAAGAGGCTCACGCGTCTCATGGGCGCGTTCCTTAAGCTTAATGGACACGCGCCGCTCCGAATACGATTCCGATTCTAGAGACTTCTCCGACACGCTCGGCTTCCATGAGTTTCTCTCTCAACGCCGTGCTAATCATCTTCATCTGTTTTCATTCTCTGACCTCAAAATCGCTACTCGTGGATTCAATAGAGCTTTGTTAATTGGTGAAGGTGGTTTTGGTTCTGTTTATAGAGGAACCCTAATTCATCATAATCATCACCGTTCTCAAATCGATGTTGCCATCAAGCAATTGAATCGTAATGGTCATCAGGGGCATAAGGAGTGGATTAATGAAGTGAATTTATTAGGGGTGATCAAGCATCCAAATTTGGTGAGGTTAGTGGGTTATTGTGCTGAAGATGATGAAAGAGGGATTCAGAGGCTTTTGGTGTATGAGTTTATGTCTAATAAGAGTTTGGAAGATCATCTTTTGGTTCGTGTTCCTTCGTCGGTTCTTCCTTGGATTACTAGATTGAGAATTGCTCAAGATGCCGCTCGTGGGTTGGCTTATCTTCATGAGGAAATGGATTTTCAGCTAATATTTCGAGATTTTAAAACATCCAACATCTTGCTAGATGAGGACTTCAATGCAAAGCTTTCTGATTTTGGACTCGCTAGGCAAGGACCCGCAGAAGGCTTTGGCTATGTTTCTACAGCGGTTGTTGGCACCATAGGATATGCTGCACCAGAGTATGTTCATACCGGAAAGCTGACTGCTAAGAGTGATGTGTGGAGCTTTGGTGTAGTTCTTTACGAGCTTATCACTGGGAGGAGAGCCGTAGAAAGAAACCTACCAAAAAACGAACAAAAGCTTCTGGATTGGGTAAAACCATATGTATCTGATCCAAAGAAGTTCCATCATATTGTCGATCCTCGACTTGAGGCACAGGATTGCACCAAATCAGCTCATAAACTTGCAGTCCTGGCAAACAAGTGTCTCATGAAGCAGCCAAAGTCTCGCCCAAAAATGAGTGAGGTGGTTGAGATTCTTGGGAACATTATTGACGAGTCCGTTCCTATGGATGAATGCATTTCCGAAGCTGTTGCAGAAACAGGAGAAGCAAATGAAGTAAATTTATCTGTAGAGAATGCTCAACCTGAACCAGCTAAACAGGGGAATAATTATCTGAAGAAGGTTTTTGAATTCAGAGACAAGGTGAGTTTAAGAAATAAATCCATTGGAAGATTTGATTGGAAAAGTTGGGCTCCTGGGCTTGTAAGAACATGGTGA 1362 0.4273 MKCFHFSNGSSEKRTTEENDEGSGSASASSSRGSRVSWARSLSLMDTRRSEYDSDSRDFSDTLGFHEFLSQRRANHLHLFSFSDLKIATRGFNRALLIGEGGFGSVYRGTLIHHNHHRSQIDVAIKQLNRNGHQGHKEWINEVNLLGVIKHPNLVRLVGYCAEDDERGIQRLLVYEFMSNKSLEDHLLVRVPSSVLPWITRLRIAQDAARGLAYLHEEMDFQLIFRDFKTSNILLDEDFNAKLSDFGLARQGPAEGFGYVSTAVVGTIGYAAPEYVHTGKLTAKSDVWSFGVVLYELITGRRAVERNLPKNEQKLLDWVKPYVSDPKKFHHIVDPRLEAQDCTKSAHKLAVLANKCLMKQPKSRPKMSEVVEILGNIIDESVPMDECISEAVAETGEANEVNLSVENAQPEPAKQGNNYLKKVFEFRDKVSLRNKSIGRFDWKSWAPGLVRTW 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02062 453 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 178 386 - -
Mepo2g02062 453 Gene3D Transferase(Phosphotransferase) domain 1 178 394 - -
Mepo2g02062 453 Gene3D Phosphorylase Kinase; domain 1 72 177 - -
Mepo2g02062 453 ProSitePatterns Protein kinases ATP-binding region signature. 98 126 IPR017441 GO:0005524
Mepo2g02062 453 ProSiteProfiles Protein kinase domain profile. 92 382 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g02062 453 MobiDBLite consensus disorder prediction 21 35 - -
Mepo2g02062 453 SUPERFAMILY Protein kinase-like (PK-like) 73 374 IPR011009 -
Mepo2g02062 453 FunFam Serine/threonine-protein kinase BIK1 64 177 - -
Mepo2g02062 453 Pfam Protein tyrosine and serine/threonine kinase 98 374 IPR001245 GO:0004672|GO:0006468
Mepo2g02062 453 CDD STKc_IRAK 98 377 - -
Mepo2g02062 453 PANTHER OS01G0588500 PROTEIN-RELATED 32 376 - -
Mepo2g02062 453 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02062 Mepo-Chr2 30040478 30044188 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02062 80 375 Glycoside Hydrolase AT3G07070 51.852 1.14e-98 300
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mepo2g02062 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02062 - - gmx:100811825 711.064