Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02053 ATGGAAGGAGAGAAAGTAAACGTGGTGATTGATTTGGTTAACGAGATAGCGAACATCTCAGACTTCAGACCTATGGTGAAAAAGCAATATTGTAACTTAGCACGAAGGTTAAAGCTGTTGATTCCTTTGTTTGAGGAAATTAGAGATATGAAAGATTCGATTCCGAATGATACTTCAAAAGCGTTGGTTTTGTTTAAAGATGCTCTTGATTCAGCTAAGGAACTTCTCAGATTTGGTTGTGAAGGAAGCAAGATTTATATGGTCCTTGAGAGGGACCGGATTATGAATAACTTCTATGAGGTGACAGCTCGGTTGGAACAATCACTGGATGGAATTTCCTATGATAAACTTGACATATCAGATGAAGTTAAAGAGCAGGTTGAACTGGTTCTTACCCAGTTCAGAAGAGCCAAAGGGAGAGTTGATGAACCAGATGCCAAGTTGTATGAAGATATGTCATTTCTTTACAACAATAGCAGTGATGCAGCTATAGATCCAGCTGTTCTAAGTCGATTAGCAGACAAATTGCAACTGATGGGAATAGCCGATCTTACACAAGAATCACTCGCTTTGCATGAGATGGTGGCTGTAAGTGGTGGGGATCCAGGGGCGCGCATTGAGAAGATGTCAATGTTATTGAAGAAGATAAAGGATCATGTGCAAATAGAAAACCTAGTCAAGGATGATACTAAAACAGCAAAAGGCGTTTCTTCAGGATTTTATGGACTAGGGGAAAATGATACGAATCATCAAGCCCCTGCTATTCCTAGTGACTTTAAATGTCCGATTTCCTTGGAATTGATGATGGATCCTGTCATTGTTTCAACAGGACAGACTTATGAGCGTTCTTGTATTGAGAAGTGGTTGCAAGACGGGCACGGGACGTGCCCAAAAACACAGCAGAGTCTCACCAGTACTGTTCTCACACCCAACTATGTCTTACGAAGCCTGATAGAACAATGGTGTGAAGCCAATGGCATAGAGCCACCAAAACGACCCAGCACTTCCGAGCCAAGTAAATCAGCATCAGCCTGCACCCCAGCTGAGCGAAGTAAGATTGAAAGTCTTATCCACAAGCTCACATCCGGCGGTCCCGAAGACCAGAGGTCAGCTGCCGGAGAGATCCGCCTTCTTGCAAAACGCAATGCAGATAACCGTGTAGCTATTGCTGAAGCTGGTGCAATCCCTCTCCTTGTTGGTCTCCTCTCCGTGCCAGACTCCCGAACTCAAGAGCATGCTGTTACAGCGCTTCTGAATCTCTCCATATATGAGAGTAACAAAGGAAGCATTGTTTCTTCTGGAGCAGTTCCAGGCATAGTTCATGTACTGAAAAGGGGAAGCATGGAAGCTCGGGAAAATGCAGCAGCAACACTTTTCAGCCTTTCAGTTATCGATGAAAATAAGGTTACAATTGGTTCTTCAGGAGCGATATCACCACTGGTGACACTGCTGAGTGAGGGTACCCAAAGGGGTAAGAAAGATGCTGCAACTGCACTCTTCAATTTGTGCATTTATCAGGGAAACAAGGGAAAAGCAGTGAGGGCTGGTGTTATTCCAACGCTCATGCGATTGCTGACAGAACGTAATGGGGGAATGGTGGATGAAGCATTGGCCATTTTGGCAATTTTGGCTAGTCATCCTGAAGGGAAAGCTGCCATTGGTGCTGCAGAGGCAGTGCCGGTTTTGGTAGAGTTTATCGGGAATGGATCCCCAAGGAACAAAGAGAACGCAGCCGCGGTTTTAGTTCACCTTTGTTCTGGAGATCGACAATATATAGCACAGGCACAAGAGCTAGGGGTGATGGCTCCATTGTTGGAATTGGCTCAAAACGGCACAGACAGAGGCAAAAGAAAGGCAACACAATTGATAGAGCGTATGAGCAGGATCCGTGAGCAGGAGCAGCATGAAGTTCCGACACAAACTGAACTTCAAGCTCAGAACGATGATATCCATCCACCTTTGATCATTAACCTCGATATTGACACCTAA 1989 0.4475 MEGEKVNVVIDLVNEIANISDFRPMVKKQYCNLARRLKLLIPLFEEIRDMKDSIPNDTSKALVLFKDALDSAKELLRFGCEGSKIYMVLERDRIMNNFYEVTARLEQSLDGISYDKLDISDEVKEQVELVLTQFRRAKGRVDEPDAKLYEDMSFLYNNSSDAAIDPAVLSRLADKLQLMGIADLTQESLALHEMVAVSGGDPGARIEKMSMLLKKIKDHVQIENLVKDDTKTAKGVSSGFYGLGENDTNHQAPAIPSDFKCPISLELMMDPVIVSTGQTYERSCIEKWLQDGHGTCPKTQQSLTSTVLTPNYVLRSLIEQWCEANGIEPPKRPSTSEPSKSASACTPAERSKIESLIHKLTSGGPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSVPDSRTQEHAVTALLNLSIYESNKGSIVSSGAVPGIVHVLKRGSMEARENAAATLFSLSVIDENKVTIGSSGAISPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVIPTLMRLLTERNGGMVDEALAILAILASHPEGKAAIGAAEAVPVLVEFIGNGSPRNKENAAAVLVHLCSGDRQYIAQAQELGVMAPLLELAQNGTDRGKRKATQLIERMSRIREQEQHEVPTQTELQAQNDDIHPPLIINLDIDT 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02053 662 ProSiteProfiles U-box domain profile. 254 328 IPR003613 GO:0004842|GO:0016567
Mepo2g02053 662 CDD MLKL_NTD 9 135 - -
Mepo2g02053 662 Gene3D - 337 649 IPR011989 -
Mepo2g02053 662 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 516 558 IPR000225 GO:0005515
Mepo2g02053 662 FunFam RING-type E3 ubiquitin transferase 529 648 - -
Mepo2g02053 662 CDD RING-Ubox_PUB 256 308 IPR045210 -
Mepo2g02053 662 MobiDBLite consensus disorder prediction 328 347 - -
Mepo2g02053 662 FunFam RING-type E3 ubiquitin transferase 254 328 - -
Mepo2g02053 662 SUPERFAMILY RING/U-box 245 331 - -
Mepo2g02053 662 Pfam Neurochondrin 516 628 IPR008709 -
Mepo2g02053 662 Pfam U-box domain 255 325 IPR003613 GO:0004842|GO:0016567
Mepo2g02053 662 PANTHER U BOX DOMAIN-CONTAINING 25 627 - -
Mepo2g02053 662 FunFam RING-type E3 ubiquitin transferase 2 115 - -
Mepo2g02053 662 FunFam RING-type E3 ubiquitin transferase 338 489 - -
Mepo2g02053 662 SMART Ubox_2 258 321 IPR003613 GO:0004842|GO:0016567
Mepo2g02053 662 Pfam Armadillo/beta-catenin-like repeat 465 503 IPR000225 GO:0005515
Mepo2g02053 662 Pfam Armadillo/beta-catenin-like repeat 382 421 IPR000225 GO:0005515
Mepo2g02053 662 Gene3D - 3 114 IPR036537 GO:0007166
Mepo2g02053 662 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 393 435 IPR000225 GO:0005515
Mepo2g02053 662 MobiDBLite consensus disorder prediction 332 347 - -
Mepo2g02053 662 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 252 328 IPR013083 -
Mepo2g02053 662 SMART arm_5 464 504 IPR000225 GO:0005515
Mepo2g02053 662 SMART arm_5 546 586 IPR000225 GO:0005515
Mepo2g02053 662 SMART arm_5 505 545 IPR000225 GO:0005515
Mepo2g02053 662 SMART arm_5 588 628 IPR000225 GO:0005515
Mepo2g02053 662 SMART arm_5 382 422 IPR000225 GO:0005515
Mepo2g02053 662 SMART arm_5 423 463 IPR000225 GO:0005515
Mepo2g02053 662 SUPERFAMILY ARM repeat 353 632 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02053 Mepo-Chr2 29888708 29893728 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02053 1 652 U-box Gene Family AT3G46510 67.939 0.0 881
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02053 - - gmx:100812160 1085.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02053 2 29888708 29893728 Mepo2g02053 2 29888708 29893728 ECH