Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02052 ATGGTGGTGAAAGGTGTCGTTGGTGCGGCAGTTCGTGGTGGGCTGGTGGTGAAAGGTGGTGTTTTGGAGTGTTTTCGTGGTGGTTATGTGGTGGCTATGTGGATGTGTTGGTGGCTCACCATATGGCTACGTGACGGTGGTGAGGTAAGTCTCGGTTTTGGTGGAATTATGAAGAAGATTAATGAAATTAGCACCCTATGTGGAGTAGAAGCATGTGCAATAATTTCAGAGCAAAACAACCCTCAAGTGGAGGTTTGGCCATCAGATTCAGGGGTCAGAAGTGTGATATCTAGGTTTAGGAGTTTGTCTGGATATGAACAAAGTAAAAAGATGGTGGATCAGGAGGTCTTCTTGAGGCAAAGCATTGGGAAAGTCTATGGGCAGTTGAAGAAGCAAAGGGAGGAAACCATGAAGAAGGAAATGACCAATATCATTGATCATTATATTCAAACCATAGAATTTAATGGAAACTCAATGAGCAAATATGATCTTAATGATTTTTCATCTTTTATTGATGAAAATTTGAAGGAGGTTGATCGGAATATGAAAGAAATGACAATTAAAGATCAAGAGGAGGTTGGAAATGGAGTGGGATTATGA 600 0.41 MVVKGVVGAAVRGGLVVKGGVLECFRGGYVVAMWMCWWLTIWLRDGGEVSLGFGGIMKKINEISTLCGVEACAIISEQNNPQVEVWPSDSGVRSVISRFRSLSGYEQSKKMVDQEVFLRQSIGKVYGQLKKQREETMKKEMTNIIDHYIQTIEFNGNSMSKYDLNDFSSFIDENLKEVDRNMKEMTIKDQEEVGNGVGL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02052 199 Pfam SRF-type transcription factor (DNA-binding and dimerisation domain) 55 79 IPR002100 GO:0003677|GO:0046983
Mepo2g02052 199 SUPERFAMILY SRF-like 54 121 IPR036879 GO:0003677|GO:0046983
Mepo2g02052 199 Gene3D - 54 125 IPR036879 GO:0003677|GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02052 Mepo-Chr2 29877230 29880461 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02052 60 183 Type I MADS-box Gene Family AT5G48670 44.444 1.06e-26 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MADS-M-type Mepo2g02052 SRF-TF 2.3e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02052 - - mtr:25491075 204.142