Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02046 ATGGAGGGTGAGAATAATAATGAAATTAATGAGGAGGGTTCAAATGGGAATAATAGTATTTCATCAAGTTCTCGATGGAACCCAACAAAAGAACAAATAAGTATGTTGGAGAATTTGTATAAGCAAGGAATAAAGACACCAAGTGCTGAAGAAATACAAGAAATCACTGCTAGGCTTAGAGTGTATGGTCACATCGAAGGAAAGAATGTCTTTTACTGGTTTCAGAATCACAAAGCTAGACAGAGACAGAAACAGAAGCAAGAAAGTATTGCTTATTTCAATCGACTTCTTCATAGACCTCAACCCATTTATCCTTCACCTATTTGTCCAAATGCTATCTGTGCACCATATTGTGTACCACAACCACAAAGTCATGAAATAAGCTATTACCCTCAAAATCCAAAAGTGCTTCTACCTGCAGTAGGTTTTAGAAGGAACCATGCTGAGAAAGTTATGTCAAATGGCATGTCAAATATCTGCAATAGTCCAATGGTATATAATGAAAACATGCAGCAGAGAATCCCTAACCCTAATTATGACTTTGGTTACAGTAATCAAGAAACATTGGATTTGTTTCCTCTGCATCCAACTGGCATATTGGAAGGGAAAACAACTGACCAGGTGTCTTCTATTGTTTCAGTTTCGGCTGATAGTTCCACCGATAAACATTCTGGTTCTTCTCATCATGATATCAATCAAGATCATGGTTATAATGGGAACAAACCCTTCTTTGACTTTTTTAGTAATTCTGCAGGACAAGGTTCTTAG 768 0.3698 MEGENNNEINEEGSNGNNSISSSSRWNPTKEQISMLENLYKQGIKTPSAEEIQEITARLRVYGHIEGKNVFYWFQNHKARQRQKQKQESIAYFNRLLHRPQPIYPSPICPNAICAPYCVPQPQSHEISYYPQNPKVLLPAVGFRRNHAEKVMSNGMSNICNSPMVYNENMQQRIPNPNYDFGYSNQETLDLFPLHPTGILEGKTTDQVSSIVSVSADSSTDKHSGSSHHDINQDHGYNGNKPFFDFFSNSAGQGS 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02046 255 SMART HOX_1 21 88 IPR001356 GO:0003677
Mepo2g02046 255 ProSiteProfiles 'Homeobox' domain profile. 19 84 IPR001356 GO:0003677
Mepo2g02046 255 CDD homeodomain 25 85 IPR001356 GO:0003677
Mepo2g02046 255 SUPERFAMILY Homeodomain-like 23 91 IPR009057 -
Mepo2g02046 255 MobiDBLite consensus disorder prediction 1 27 - -
Mepo2g02046 255 FunFam WUSCHEL-related homeobox 4 23 90 - -
Mepo2g02046 255 MobiDBLite consensus disorder prediction 212 235 - -
Mepo2g02046 255 Gene3D - 23 91 - -
Mepo2g02046 255 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 7 245 IPR044555 GO:0003700|GO:0099402
Mepo2g02046 255 MobiDBLite consensus disorder prediction 8 27 - -
Mepo2g02046 255 Pfam Homeodomain 23 83 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02046 Mepo-Chr2 29813467 29815567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02046 17 251 Wox Gene Family AT5G59340 41.016 1.40e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Mepo2g02046 Homeodomain 4.8e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02046 - - pvu:PHAVU_011G064900g 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g02046 2 29813467 29815567 Mepo2g02046 2 29813467 29815567 ECH