Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02032 ATGTTCGTTCATCTTTCTTCTTCCAAATTAATAGCCACGATAGCAAATACTAGACCTCTTCCTCAATTACTCCTATGCATTCGCCATCATTCATCTACCAAATTGTTCATCGCAGGGCTTTCCTATAACACGAATGAAACTGTCCTGGGAGACACCTTCAAACAACATGGGCAAGTCATTGAAGTTAAAGTAATATGTGACCACAAAACTGGAGAATCAAAAGGGTACGGATTTGTGAGGTTCAATTCTGAAACTGCTGCTGCCACAGCCCGCAAAGAATTGCACGGCCAGATGGTGGATGGTAGACGTATTCGAGTGGGTTATGCGCACAAAGGGTAA 339 0.4307 MFVHLSSSKLIATIANTRPLPQLLLCIRHHSSTKLFIAGLSYNTNETVLGDTFKQHGQVIEVKVICDHKTGESKGYGFVRFNSETAAATARKELHGQMVDGRRIRVGYAHKG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02032 112 FunFam Glycine-rich RNA-binding protein 2, mitochondrial 21 112 - -
Mepo2g02032 112 SUPERFAMILY RNA-binding domain, RBD 21 111 IPR035979 GO:0003676
Mepo2g02032 112 SMART rrm1_1 34 107 IPR000504 GO:0003723
Mepo2g02032 112 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED 29 111 - -
Mepo2g02032 112 Gene3D - 15 112 IPR012677 -
Mepo2g02032 112 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 33 111 IPR000504 GO:0003723
Mepo2g02032 112 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 35 105 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02032 Mepo-Chr2 29628973 29630341 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02032 33 111 Eukaryotic Initiation Factors Gene Family AT3G16380 39.241 5.05e-13 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02032 K13195 - gmx:100306540 146.362