Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02031 ATGTCTGCAGCACTCGATATGACCCTCGAAGACATCATCAAGAACAACAAAAAATCCGGATCCGGTAACCCTAGAGGAGGCCGTTCCAGACCCGGACCCGCTTCCGGACCTGGACCAGCTCGCCGTATCCCTAACCGCGCCGGTAACCGCGCTGCACCTTACTCCGCCGCTAAGGCGCCGGAGACGACGTGGCAGCATGATTTGTATGCAGATCAACATGTAGCTGCGGCGGCGTATCCAGCAGCTCAAGGTGGTCGTGCTCCTTCTATTGAAACTGGAACCAAGCTCTATATCTCTAATTTGGATTATGGTGTTTCCAATGATGATATTAAGGAATTGTTTTCTGAAGTTGGTGACTTGAAACGGCACGGCGTTCATTATGACAGGAGTGGCAGATCGAAGGGTACCGCAGAAGTAGTCTTCTCACGGAGACAAGATGCTGTAGCTGCTGTGAAGAGATACAACAATGTTCAACTAGATGGGAAACCAATGAAGATAGAGATTGTTGGAACCAACATTTCTACACCTGGTGCGGCTCCTGTTGTAAATGCAGCCATTGGAAATTTTAATGGAATTCCTCAAAGTGGGCAAGGCAGAGTTGGAGAATTTCGAGGGCCGGGAGGAAGAGGTCAAGGCATTCGAAGAAATCGAGGACGTGGAAGAGGTAGCGGTGGACCCCGTGGTGGTGGTCGCGGTGGAGGTCGTGGTAGAGGCCGCGACGAAAAAGTATCTGCAGAAGATCTTGATGCTGAGCTGGAGAAGTATCATGCGGAGGCCATGCAATTAAACTGA 792 0.5076 MSAALDMTLEDIIKNNKKSGSGNPRGGRSRPGPASGPGPARRIPNRAGNRAAPYSAAKAPETTWQHDLYADQHVAAAAYPAAQGGRAPSIETGTKLYISNLDYGVSNDDIKELFSEVGDLKRHGVHYDRSGRSKGTAEVVFSRRQDAVAAVKRYNNVQLDGKPMKIEIVGTNISTPGAAPVVNAAIGNFNGIPQSGQGRVGEFRGPGGRGQGIRRNRGRGRGSGGPRGGGRGGGRGRGRDEKVSAEDLDAELEKYHAEAMQLN 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02031 263 CDD RRM_THOC4 94 168 - -
Mepo2g02031 263 MobiDBLite consensus disorder prediction 1 59 - -
Mepo2g02031 263 MobiDBLite consensus disorder prediction 193 248 - -
Mepo2g02031 263 Gene3D - 77 247 IPR012677 -
Mepo2g02031 263 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 94 171 IPR000504 GO:0003723
Mepo2g02031 263 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 261 - -
Mepo2g02031 263 SMART rrm1_1 95 167 IPR000504 GO:0003723
Mepo2g02031 263 Coils Coil 245 263 - -
Mepo2g02031 263 SUPERFAMILY RNA-binding domain, RBD 27 168 IPR035979 GO:0003676
Mepo2g02031 263 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 96 164 IPR000504 GO:0003723
Mepo2g02031 263 Pfam C-terminal duplication domain of Friend of PRMT1 207 257 IPR025715 -
Mepo2g02031 263 MobiDBLite consensus disorder prediction 233 248 - -
Mepo2g02031 263 SMART FoP_duplication_2 193 263 IPR025715 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02031 Mepo-Chr2 29622359 29626531 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02031 93 196 Eukaryotic Initiation Factors Gene Family AT1G71770 28.205 4.56e-09 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02031 K12881 - gmx:100775827 321.627