Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02013 ATGAATATTGGACTAGCTAGTGTGTCACATTTTGGCAAGATGGAACTCATGACAAACATTGTTGATGCAGTAAATGATGAAAATCTGTTATTTGGTATGATGGAAAGAGGCAGTGGCGGAGAGGGTGGCAGTAGTGGTGGTGGTGGTTGTGGTGGAGGTGGAGATGAGACAAATTTGAAAACGGGTCCTTGGACAACAGCAGAGGATACAATTTTGATAGATTATGTGACAAAACATGGTGAAGGGAATTGGAATGTTGTTCAAAGAAATACATGTTTGAATCGTTGTGGGAAGAGTTGTAGGCTTAGATGGACTAATCATTTAAGACCCAATTTGAAGAAAGGTGCATTTTCTCCTGAAGAAGAGAAACTCATTGTTGAACTTCATGCTCAATTTGGTAACAAATGGGCTCGAATGGCTGCTTTGTTACCCGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACAAGGATCAAACGTCGTCAAAGACAAGGTCTTCCTCTCTATTCAGACGAACACGATCGTTCTAACACACGAACAACAACTTCACCATGTGTCACACCAACAGGAACAAACCATAACAACATTACACCAAAATTTGAGTTTTTTAATCAAAACCACCACCAATATCAACAACAGCAACATCAAAACCTTCACCCTCTATCCCCAACATCAACTCATCATCATTCTCCTCTCTCTTCACCACTCCAACATAGACAACAACGACAACATTCTTATTCTCCTCACACATTCATAGAGACTTCATCTGCATCATTGTCATCTTCTTCACCTTCACCGCTCTCTTTCACTTTCCAAAGACCTGCACCACTCTTATCTACACCTTTTCGCTTCAAACGTTCTCGTTCCAATCCCAACTTTAGTCTTCAAGTCCCTTCCATAACACAAAATTGCTCCGCTTCACTCCATGATCCTTCTTTAACCTCTCATCAAGATAGTTTCAGGTTCCCAATTCAATACAACTCGAATTTTTCTCAATACTCTCATACTCCTTTGTTGGTCTCCGATCGAGGGGTTTCTTCATCGTCTTTACCTTTCTTCACAAAGTTCGAGCTACCTTCAAACCAATTTTCAAGACTATCATCAGAGCAAGATGTTAAGGTTAACAATATTGAGTTCAATGAGGCTAATTTTTTTCAGACCAATAATTGTGACTTAATGGGAGATCTTTTAATGAATGCACATAAACCACCATCTGGTCAAAATTCAAAGAAAAGAAGTTACTTGAGCTTAAATAAAGGAAATGATATGTTTAATGGTGCCAAAGCCTAG 1293 0.3921 MNIGLASVSHFGKMELMTNIVDAVNDENLLFGMMERGSGGEGGSSGGGGCGGGGDETNLKTGPWTTAEDTILIDYVTKHGEGNWNVVQRNTCLNRCGKSCRLRWTNHLRPNLKKGAFSPEEEKLIVELHAQFGNKWARMAALLPGRTDNEIKNYWNTRIKRRQRQGLPLYSDEHDRSNTRTTTSPCVTPTGTNHNNITPKFEFFNQNHHQYQQQQHQNLHPLSPTSTHHHSPLSSPLQHRQQRQHSYSPHTFIETSSASLSSSSPSPLSFTFQRPAPLLSTPFRFKRSRSNPNFSLQVPSITQNCSASLHDPSLTSHQDSFRFPIQYNSNFSQYSHTPLLVSDRGVSSSSLPFFTKFELPSNQFSRLSSEQDVKVNNIEFNEANFFQTNNCDLMGDLLMNAHKPPSGQNSKKRSYLSLNKGNDMFNGAKA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02013 430 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 40 416 - -
Mepo2g02013 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 108 IPR017930 -
Mepo2g02013 430 MobiDBLite consensus disorder prediction 180 247 - -
Mepo2g02013 430 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 109 163 IPR017930 -
Mepo2g02013 430 ProSiteProfiles Myb-like domain profile. 109 159 IPR001005 -
Mepo2g02013 430 MobiDBLite consensus disorder prediction 402 430 - -
Mepo2g02013 430 MobiDBLite consensus disorder prediction 165 247 - -
Mepo2g02013 430 MobiDBLite consensus disorder prediction 403 421 - -
Mepo2g02013 430 ProSiteProfiles Myb-like domain profile. 56 108 IPR001005 -
Mepo2g02013 430 MobiDBLite consensus disorder prediction 165 179 - -
Mepo2g02013 430 CDD SANT 63 108 IPR001005 -
Mepo2g02013 430 Gene3D - 116 162 - -
Mepo2g02013 430 Gene3D - 55 113 - -
Mepo2g02013 430 CDD SANT 116 157 IPR001005 -
Mepo2g02013 430 MobiDBLite consensus disorder prediction 35 61 - -
Mepo2g02013 430 SUPERFAMILY Homeodomain-like 58 155 IPR009057 -
Mepo2g02013 430 SMART sant 113 161 IPR001005 -
Mepo2g02013 430 SMART sant 60 110 IPR001005 -
Mepo2g02013 430 FunFam MYB-related transcription factor 60 113 - -
Mepo2g02013 430 Pfam Myb-like DNA-binding domain 61 108 IPR001005 -
Mepo2g02013 430 Pfam Myb-like DNA-binding domain 114 157 IPR001005 -
Mepo2g02013 430 FunFam Transcription factor GAMYB 116 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02013 Mepo-Chr2 29135150 29136916 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02013 42 173 MYB Transcription Factor Family AT5G06100 74.242 7.69e-65 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g02013 Myb_DNA-binding 7.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02013 - - lja:Lj6g3v0869180.1 436.417