Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g02008 ATGTTTTTCTGTTTCTCACACTTTGTTGTAGGTTTGAGTAGATCAGGTAAGAGTTGCAGGTTACGTTGGGTTAATTATCTTCACCCTGATCTCAAACGTGGCAAGATGACACCCCAAGAAGAAAGACTTGTTATGGAACTTCACTCTAAATGGGGAAATAGATGGTCAAGAATTGCTAGAAAACTACCAGGAAGAACAGACAATGAGATTAAGAATTACTGGAGGACACACATGAGAAAAAAGAGGGCACAAGAGAAAAAACACGCAACACCTTCGATTTCATCATCACCTGATCAATCTTCTAGTTGTCAATCCTCACATTTCTCAAATAGTAACCATGGTGTGGATTCACATGCTTCCAACAAAGAGTCTGAGGAAGAAAATTACCAAGTAGAAGAAATTGAACAAGGGTACTCAATGGATGATATATGGAAAGATATTGCTATGTCTGAAGATGACATCAATGTTCTTCAACCTGTTTTTGATGGAACTAGTGAAGAGAATAGTAATAATTTATCTTGTCCTATAATGCCTTCTACATCATCATGGGATTATTCATATTTAGATCCATTGTGGGTGATGGATGAAGAAGAAAGCAAGATGTTATTCCCTCCTATTGGGGACCAATATTTTTCCTTCTATGATCAACAAGGGAACACATTTCTAACTGGTTAA 675 0.3704 MFFCFSHFVVGLSRSGKSCRLRWVNYLHPDLKRGKMTPQEERLVMELHSKWGNRWSRIARKLPGRTDNEIKNYWRTHMRKKRAQEKKHATPSISSSPDQSSSCQSSHFSNSNHGVDSHASNKESEEENYQVEEIEQGYSMDDIWKDIAMSEDDINVLQPVFDGTSEENSNNLSCPIMPSTSSWDYSYLDPLWVMDEEESKMLFPPIGDQYFSFYDQQGNTFLTG 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g02008 224 CDD SANT 35 78 IPR001005 -
Mepo2g02008 224 Gene3D - 36 79 - -
Mepo2g02008 224 ProSiteProfiles Myb-like domain profile. 28 78 IPR001005 -
Mepo2g02008 224 SMART sant 32 80 IPR001005 -
Mepo2g02008 224 FunFam MYB transcription factor 35 106 - -
Mepo2g02008 224 Gene3D - 6 32 - -
Mepo2g02008 224 MobiDBLite consensus disorder prediction 79 129 - -
Mepo2g02008 224 Pfam Myb-like DNA-binding domain 33 77 IPR001005 -
Mepo2g02008 224 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 28 82 IPR017930 -
Mepo2g02008 224 MobiDBLite consensus disorder prediction 89 117 - -
Mepo2g02008 224 SUPERFAMILY Homeodomain-like 13 84 IPR009057 -
Mepo2g02008 224 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 10 133 IPR044676 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g02008 Mepo-Chr2 29037677 29039671 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g02008 5 201 MYB Transcription Factor Family AT5G59780 57.071 2.24e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo2g02008 Myb_DNA-binding 9.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g02008 K09422 - gmx:100776886 268.855