Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01986 ATGGCTATCAAGGTTTATGAGCTTAGGCAAAAAACAAAAGCAGATCTTCTTAATCAATTGAAGGATCTGAAAGCTGAACTTGCTCTCCTTCGCGTTGCGAAAGTCACCGGCGGTGCCCCAAATAAGCTCTCCAAAATCAAAGTTGTTCGGCTAAACATCGCACAGGTTTTGACTGTGATTTCACAGAAGCAAAAGACAGCATTGAGGGAAGCTTATAAGAAGAAGAAGTACTTGCCTTTGGATCTCCGTCCCAAGAAGACAAGAGCTATTAGAAGACGCCTCACTAAGCATCAGCTCTCTTTGAAGACAGAGCGTGAGAAGAAGAAGGAAATCTACTTCCCAGTGAGAAAGTATGCCATTAAGGCGTAA 369 0.4309 MAIKVYELRQKTKADLLNQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLNIAQVLTVISQKQKTALREAYKKKKYLPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEIYFPVRKYAIKA 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01986 122 Coils Coil 6 33 - -
Mepo2g01986 122 NCBIfam 50S ribosomal protein L29 7 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mepo2g01986 122 CDD Ribosomal_L29_HIP 7 63 - -
Mepo2g01986 122 FunFam 60S ribosomal protein L35 77 122 - -
Mepo2g01986 122 Gene3D - 77 122 - -
Mepo2g01986 122 SUPERFAMILY Ribosomal protein L29 (L29p) 3 64 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mepo2g01986 122 Gene3D - 1 76 IPR036049 GO:0003735|GO:0005840|GO:0006412
Mepo2g01986 122 PANTHER 60S RIBOSOMAL PROTEIN L35 2 122 IPR045059 GO:0000463|GO:0022625
Mepo2g01986 122 Pfam Ribosomal L29 protein 7 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mepo2g01986 122 Hamap 50S ribosomal protein L29 [rpmC]. 3 63 IPR001854 GO:0003735|GO:0005840|GO:0006412
Mepo2g01986 122 FunFam 60S ribosomal protein L35 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01986 Mepo-Chr2 28858700 28860882 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01986 3 121 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 87.395 2.82e-69 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01986 K02918 - gmx:100801539 218.779