Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01963 ATGAAACAGAAAGTGAAAGTGATGGAACCATTTGCAAGAGACCATCGAGGTTCACTAGAAGTCTTCAATCCATCTTCATCTGACGACAACAACAACAATGGGAATCCAAATCCAATCAATTCATGGAACACTTGGACAACAAACTCACGAGCCGACGAAACTCCGCAACAACCGACGCGTGACTCCATCAACTCCGATGAAGTCCCCGTCGCCACTTCTTGGATGGCACTCAAAGAAACCACACCTCCGCCAGTTTCCAACGAACCTGGCTCCGCTGCAGCACAACGAGCAGCGGAGTGGGGGTTAGTGTTGAAAACTGATTCGGAGACGGGGAAGCCACAAGGAGTGGCAGTTAGAAGCTCGGGTGGTGGTTCGAGGAGGGACTCGAATAATTCAATGAGAAGTTCCGGTGAAAGTTCCGATGATGGAAGGGAGTTCAGAGGAATACCGAGAGTTTCGGAGGATTTGAGAGATGCTCTATCGGCATTTCAACAGACATTTGTTGTTTCTGATGCTACTAAACCGGATTACCCGATCATGTATGCTAGTGCTGGGTTTTTTAACATGACGGGGTATACCTCCAAAGAGGTCATTGGAAGAAACTGTCGATTTATGCAGGGAGCTGACACAGATCCGAATGATGTGGCAAAGATAAGAGAATCACTAGCAGCAGGAACAACTTACTGTGGAAGATTACTAAATTACAAGAAAGATGGGACACCATTTTGGAATCTTCTCACTATTGCACCCATCAAGGACGAAAATGGCAAAATCCTCAAACTTATCGGAATGCAAGTGGAAGTTAGCAAGCATACTGAGGGGACCAAGGAGAAGATGTTACGTCCCAATGGATTGCCCGAATCCTTGATTCGATACGATGCTCGTCAGAAAGAGAAGGCAAACTCATCAGTAAATGAGTTGGTAGAGGCAGTGAGCAGAAGACCAAGGTCACTCAGTGAATCAGCAAACCGTCTTCCCTTCATCAAAGTGCCAACAAAAACAGTACATAGTGATCATGCAACTCAAGAACTTCAAAAAACACCATCCAAGTCATCAAGGAGAAGAAAATCTGAGAGTACTTTGCCTTCATTTAGACGCAAATCACATTCTGGAGGAGGAGATACTCATTTTAATTCAATGCATCCCATCACTGAGACCCCCGAGAATAAAATCAACTCGCGCCGCCGTTCTTTCATGGGGTTTATCAGGAAAAGTCTGTCGAACAATGAAAGCTTTAATGATGAACAACTTGCTGATGATGAGGAAAGCTCTGAGGATGATGAAAGGCCTGATAGTGTTGATGAAAAAATTAAAAAGAGGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATCGAGAAGAACTTTGTCATTACTGATCCTAGGCTCCCTGATAATCCCATTATCTTTGCATCTGATAGCTTCTTAGAGCTTACAGAATATTCTCGGGAAGAAATATTGGGAAGAAATTGCAGGTTTTTGCAAGGACCTGAAACTGATCCTGCAACAGTGAAAAAAATTAGACAAGCTATTGACAATCAAACAGAAGTTACTGTGCAGCTTATTAATTATACAAAGAGTGGTAAAAAGTTCTGGAACCTGTTCCATTTGCAGCCAATGCGTGATCAGAAGGGAGAGGTACAGTATTTTATTGGAGTTCAACTTGATGGTAGTCAACATGTGGAGCCTCTTCACAACCGTATTGCAGAAGATACAGCAAAAGAGGGAGAAAATTTGGTAAAGAAAACTGCAGAAAATGTCGATGATGCATTGAGAGAACTCCCAGATGCTAATATGAAACCAGAAGATCTGTGGATGAATCATTCAAAAGTGGTTCACCCTAAACCTCATAGGAGGGATGATGCTGCTTGGAGTGCTATTCAGAAGATCATGGAGAGTGGAGAACAGATAGGCTTGAAGCATTTTAAGCCAATTAAACCTTTAGGGTCAGGAGACACTGGCAGTGTCCATCTTGTGGAGCTATGTGGAACTGGTCAACATTTTGCCATGAAGGCTATGGAGAAGGCTGTTATGCTCAACCGTAACAAGGTGCATAGAGCTTGCACGGAGAGAGAAATCTTAGACATGTTGGACCACCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACGAAAACACATATTTGTTTGATAACTGATTACTGCCCTGGAGGAGAATTGTTCCTGCTGCTTGAACGCCAGCCAGCAAAGGTTCTTAAAGAAGATGCAGTGAGATTTTATGCCGCTGAAGTAGTTACTGCATTGGAGTACCTTCATTGTCAAGGGATAATATATAGGGATTTGAAGCCAGAAAATGTTTTACTACAAAGAAGTGGACATGTGTCTCTAACAGATTTTGATTTGTCTTGTTTAACATCTTGCAAACCACAGCTTTTAATTTCAACTACAAATGACAAGAAGAAAGGACCACAGGCTCCAATATTTATGGCTGAACCAATGAGAGCATCAAATTCTTTTGTTGGCACAGAAGAGTACATAGCTCCGGAAATTATTACTGGTTCTGGCCATACTAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATATGAAATGATTTATGGATATACACCATTCAGGGGAAAGAATAGGCAAAGAACATTTGCAAATATTCTCCACAAGGATCTTAGATTTCCCAAAAATAAACAGGTTAGTCTCAGTGCAAAGCAGTTAATTTATCGCTTGTTGCAAAGAGATCCAACTAGCAGGTTGGGTTCAAATGGAGGAGCAAATGATATCAAAAACCATCCCTTCTTCAGGGGTATCAATTGGGCCCTAGTCCGATGCACGAAACCTCCTGAGCTTGATGCTCCTCTCTTTGATACAAATGAAGAAGAAAAGGGAAAGGAAAAGGAAGACAAATATGTAGATATTGGACAAGAGGATATGAGTGTCTTCTGA 2931 0.4227 MKQKVKVMEPFARDHRGSLEVFNPSSSDDNNNNGNPNPINSWNTWTTNSRADETPQQPTRDSINSDEVPVATSWMALKETTPPPVSNEPGSAAAQRAAEWGLVLKTDSETGKPQGVAVRSSGGGSRRDSNNSMRSSGESSDDGREFRGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFNMTGYTSKEVIGRNCRFMQGADTDPNDVAKIRESLAAGTTYCGRLLNYKKDGTPFWNLLTIAPIKDENGKILKLIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSSVNELVEAVSRRPRSLSESANRLPFIKVPTKTVHSDHATQELQKTPSKSSRRRKSESTLPSFRRKSHSGGGDTHFNSMHPITETPENKINSRRRSFMGFIRKSLSNNESFNDEQLADDEESSEDDERPDSVDEKIKKREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVKKIRQAIDNQTEVTVQLINYTKSGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAEDTAKEGENLVKKTAENVDDALRELPDANMKPEDLWMNHSKVVHPKPHRRDDAAWSAIQKIMESGEQIGLKHFKPIKPLGSGDTGSVHLVELCGTGQHFAMKAMEKAVMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHICLITDYCPGGELFLLLERQPAKVLKEDAVRFYAAEVVTALEYLHCQGIIYRDLKPENVLLQRSGHVSLTDFDLSCLTSCKPQLLISTTNDKKKGPQAPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLYEMIYGYTPFRGKNRQRTFANILHKDLRFPKNKQVSLSAKQLIYRLLQRDPTSRLGSNGGANDIKNHPFFRGINWALVRCTKPPELDAPLFDTNEEEKGKEKEDKYVDIGQEDMSVF 976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01963 976 CDD PAS 179 268 IPR000014 -
Mepo2g01963 976 Gene3D Transferase(Phosphotransferase) domain 1 729 941 - -
Mepo2g01963 976 FunFam LOV domain-containing protein 433 597 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 123 137 - -
Mepo2g01963 976 CDD PAS 459 559 IPR000014 -
Mepo2g01963 976 SUPERFAMILY PYP-like sensor domain (PAS domain) 173 265 IPR035965 -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 373 387 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 1 16 - -
Mepo2g01963 976 SMART serkin_6 645 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01963 976 FunFam Putative LOV domain-containing protein 729 941 - -
Mepo2g01963 976 SUPERFAMILY Protein kinase-like (PK-like) 627 948 IPR011009 -
Mepo2g01963 976 ProSiteProfiles PAS repeat profile. 152 222 IPR000014 -
Mepo2g01963 976 SMART pas_2 446 515 IPR000014 -
Mepo2g01963 976 SMART pas_2 154 224 IPR000014 -
Mepo2g01963 976 Coils Coil 576 596 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 948 969 - -
Mepo2g01963 976 Gene3D PAS domain 432 597 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 348 363 - -
Mepo2g01963 976 ProSitePatterns Protein kinases ATP-binding region signature. 651 674 IPR017441 GO:0005524
Mepo2g01963 976 FunFam Putative LOV domain-containing protein 166 323 - -
Mepo2g01963 976 SMART pac_2 521 563 IPR001610 -
Mepo2g01963 976 SMART pac_2 229 271 IPR001610 -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 1 73 - -
Mepo2g01963 976 ProSiteProfiles PAS repeat profile. 444 517 IPR000014 -
Mepo2g01963 976 ProSiteProfiles Protein kinase domain profile. 645 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01963 976 PANTHER FLIPPASE KINASE 1-RELATED 450 953 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 414 429 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 409 443 - -
Mepo2g01963 976 FunFam LOV domain-containing protein 644 728 - -
Mepo2g01963 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Mepo2g01963 976 CDD STKc_phototropin_like 643 948 - -
Mepo2g01963 976 Gene3D PAS domain 166 325 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 296 394 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 105 147 - -
Mepo2g01963 976 ProSiteProfiles PAC domain profile. 518 572 IPR000700 -
Mepo2g01963 976 Pfam PAS domain 467 559 IPR000014 -
Mepo2g01963 976 Pfam PAS domain 173 269 IPR000014 -
Mepo2g01963 976 ProSiteProfiles PAC domain profile. 226 280 IPR000700 -
Mepo2g01963 976 Gene3D Phosphorylase Kinase; domain 1 644 728 - -
Mepo2g01963 976 Pfam Protein kinase domain 647 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01963 976 NCBIfam PAS domain S-box protein 179 273 IPR000014 -
Mepo2g01963 976 NCBIfam PAS domain S-box protein 469 559 IPR000014 -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 948 976 - -
Mepo2g01963 976 MobiDBLite consensus disorder prediction 20 69 - -
Mepo2g01963 976 SUPERFAMILY PYP-like sensor domain (PAS domain) 460 559 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01963 Mepo-Chr2 28539557 28550220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01963 11 973 AGC Kinase Gene Family AT3G45780 68.831 0.0 1337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Mepo2g01963 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01963 K20715 - gmx:100804524 1473.76