Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01959 ATGAACAATAATGTTGGGAAAAAAAGTTTGGCAGAACAAAATCACGCGCTTAATGACAGAAAGAGTCTCAATAATAGAGTAGTTAATGAAGGGCCAGGGTCTGAATCATCAACTGGAAATGACACTAGATTTAGTAAGGTAACCAAAGATGGAAACAGTGGGTTGAAGGGATCGATTCGAATCAATGAGAGGTTGCAGATTTCACAACAACCACCACCTCGTAATCCAGTTACATACTGGGAAAAATTTCTCCCTGTTACATCAATAAAAGTTCTGCTGGTGGACGATGATGATTCAACACGCAACGTTGTGTGTGCTTTGTTAAGGAATTGTGGCTATGAAGTCAATGCTGTTTCCAATGGTCTTCAAGCGTGGAAAGTCCTAGAAGATCCAGGAAATCACATTGATCTTGTTCTAACAGAGATAGCTATGCCTTTTGTAACGGGAATAGGTCTTTTGTGCAAGATAATGAGTCACAAAACTCTAAAGAATATTCCTGTGATTATGATGTCATGTCATGATTCTATGGGTATAGTGTTTAAGTGTTTGTCAAAAGGCGCAGCTGATTTTTTAGTCAAACCTATTCGGAGGAACGAACTTAAAAACCTCTGGCAACATGTTTGGAGAAGATGCCATAGTTCTAGTGATAGTGGGAGTGAAAGTGGAACAAACACCCGAAAATTTGCAAAGTCAAGAAGCATCTGTGCATTTGACAACAATACTGGTAGCAGTGATGAGAATGATTACGGAAGCAGAGGCTTGAGTGTTCAAGATGGAAGTGACAAAGGAAGTGGAACTCAGAGTTCATGGACTACAAATCTAGCTCAAGTTAGCAGCAGCCCTCGTCCAGTTTCACCTCATAATCAATCTCATGATGCTCCTGATAGCACGTGTGCCCAAGTGGTGCATACAAAGCCTGAAAACATTAGTAGTATGTGGGTCCATGCCACAGAAAAAGAGTTCCATGAACCAATTGATCATCTTGATGATATTGCAATGGGTAAAGATTTGGCTATGGGAATATCTTTGAACACGCAACAAAAGCATGCACTTGAGGAATTATCTAACATTCCAATGCGTAAAGGGGTTAATAAAATGTCTGATATAGATGGTATGCAGCTCAATAAAGGACAGAATAATGTCTGTGAAAAAGTACAACTGGAAGAGGACAGTGATAAAACTAGGATGCACGAAAATCAGGGTACAAATTTTGGTGTTGCTGATAGCAGCGATCCACATGCTGAAAGCAGAGATTTGAACACTTCAAATGGTTTTTCTGGTTTTGCAAAAACAAAAGCAAGTTGTTGCTTCAAACAGCATCCATCACTTGAACTAACATTGGAAAGGATGGGAGAAGTAAAAGATGATGAACATGTCACAGGTGATGAATGCAATGTTTTGAGACATTCAAATCTATCAGCATTCTCCAAATATAATACAGCTTCTGCTTACCAGGCTCGAACTGGAAATGTAGGAAGCTGTTCCCCTCTAGACAATAGCTCAGTTGCACCAATTACAGAGACAATGCACAACTTCACATCTCATTCAAATGCCACTCCTCCAAATCAGCAGTCTAATGGAAGCAACAACATTAATGACCTGACTTCCACTAATACATATCTTAGCATGAAACCCGAAAATTTTGACAAGAAACCCGAGTCTGCTGGAGGGATTGGCTCTTTTCTTTCCACTGAACTCCAAACTGTGCAAAATAATAGTATTTCTGCACCTCAGAGGAAGACTTCTTCCCAGGATGAATATGCCCGAATCGTTGAAGGACAGGTTCGAGTTTCTGAACAAGGATTCCAAGTTGAGCACACTCACCATCAACTTCAACATTGTAATCGCATCGCCGACAAGGCAGCAGTAGATCTCCAATCAGTTCACGATCTCTTACTGAAAAGCACGACCAAAGATACTCAGCAATGTACATTAGCAAATGCATTTGGAGGGCCAGCAGAAAGTAATGGTACAAACTATGGTTTGAATGGAAGTGCAGTTGAGAGTGATCATGGGAGTAATGGACAGGATGGAAGCAACACTTTGACAATCAGAATGATAAATGTGGAAAATTGTGATGTGGCAGCTGGGAGCATTGGAGTTGGTGCAATTGATAGGATAAACATTGGAAGTGGGTCATATGAAGAACGAATTGCATTGAGGGAGGCTGCCTTGACAAAATTTCGTCAAAAGAGAAAAGAAAGATGCTTTGACAAAAAGGTTAGATATCACAGCAGGAAAAAATTGGCGGATCAGCGGCCACGTGTTAGGGGACAATTTGTTAAACAAATAGTGTCTGATACCAAAGAAGAAGAAAATAAAGAAAGCGAGGAACTTGTATCTATGGATAATTCTAGCGATGTTCCGCAACAATACCAATCAAAATGTTGA 2391 0.4019 MNNNVGKKSLAEQNHALNDRKSLNNRVVNEGPGSESSTGNDTRFSKVTKDGNSGLKGSIRINERLQISQQPPPRNPVTYWEKFLPVTSIKVLLVDDDDSTRNVVCALLRNCGYEVNAVSNGLQAWKVLEDPGNHIDLVLTEIAMPFVTGIGLLCKIMSHKTLKNIPVIMMSCHDSMGIVFKCLSKGAADFLVKPIRRNELKNLWQHVWRRCHSSSDSGSESGTNTRKFAKSRSICAFDNNTGSSDENDYGSRGLSVQDGSDKGSGTQSSWTTNLAQVSSSPRPVSPHNQSHDAPDSTCAQVVHTKPENISSMWVHATEKEFHEPIDHLDDIAMGKDLAMGISLNTQQKHALEELSNIPMRKGVNKMSDIDGMQLNKGQNNVCEKVQLEEDSDKTRMHENQGTNFGVADSSDPHAESRDLNTSNGFSGFAKTKASCCFKQHPSLELTLERMGEVKDDEHVTGDECNVLRHSNLSAFSKYNTASAYQARTGNVGSCSPLDNSSVAPITETMHNFTSHSNATPPNQQSNGSNNINDLTSTNTYLSMKPENFDKKPESAGGIGSFLSTELQTVQNNSISAPQRKTSSQDEYARIVEGQVRVSEQGFQVEHTHHQLQHCNRIADKAAVDLQSVHDLLLKSTTKDTQQCTLANAFGGPAESNGTNYGLNGSAVESDHGSNGQDGSNTLTIRMINVENCDVAAGSIGVGAIDRINIGSGSYEERIALREAALTKFRQKRKERCFDKKVRYHSRKKLADQRPRVRGQFVKQIVSDTKEEENKESEELVSMDNSSDVPQQYQSKC 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01959 796 ProSiteProfiles CCT domain profile. 721 763 IPR010402 GO:0005515
Mepo2g01959 796 FunFam Two-component response regulator-like PRR37 89 247 - -
Mepo2g01959 796 MobiDBLite consensus disorder prediction 1 52 - -
Mepo2g01959 796 PANTHER TWO-COMPONENT RESPONSE REGULATOR 90 342 IPR045279 GO:0009736
Mepo2g01959 796 SMART REC_2 89 204 IPR001789 GO:0000160
Mepo2g01959 796 MobiDBLite consensus disorder prediction 767 796 - -
Mepo2g01959 796 MobiDBLite consensus disorder prediction 782 796 - -
Mepo2g01959 796 MobiDBLite consensus disorder prediction 1 73 - -
Mepo2g01959 796 Pfam Response regulator receiver domain 91 202 IPR001789 GO:0000160
Mepo2g01959 796 MobiDBLite consensus disorder prediction 243 295 - -
Mepo2g01959 796 SUPERFAMILY CheY-like 88 215 IPR011006 -
Mepo2g01959 796 MobiDBLite consensus disorder prediction 511 533 - -
Mepo2g01959 796 MobiDBLite consensus disorder prediction 767 781 - -
Mepo2g01959 796 MobiDBLite consensus disorder prediction 654 678 - -
Mepo2g01959 796 ProSiteProfiles Response regulatory domain profile. 90 208 IPR001789 GO:0000160
Mepo2g01959 796 MobiDBLite consensus disorder prediction 391 420 - -
Mepo2g01959 796 CDD psREC_PRR 91 194 - -
Mepo2g01959 796 Gene3D - 88 242 - -
Mepo2g01959 796 Pfam CCT motif 721 763 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01959 Mepo-Chr2 28501773 28508999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01959 73 482 Response Regulator Gene Family AT5G60100 45.606 5.37e-86 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Mepo2g01959 Response_reg 4e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01959 K12129 - gmx:100785796 947.192