Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01950 ATGTTAGATCTTAATCTAAACGATTCAAACTCAACTGATTCAACTCAGAACCAGAACCATAACTCGCCGATGATTTCAAAGAACTTTCCGCAAGAATCAGGAACATCGAATTCCTCGATCGTCAATGCTGACGGTGACGAAGACTCGTGTTCCACGCGCGATTTCACTTTGAGTTTCGATATTCTGAAAATGGAAGGTTCGAATTCAAACAACGTCGTAACGAAGGAGTTTTTCCCTGTGAAGTTGCAAGCTACGTCGTCGTCGTTTGATTTGTCGTTTAATCAAAACGAAGAGATGAAGATTGTTCAAGCGCCACAACAAGTCAAGAAGAGTAGAAGAGGACCTAGGTCTCGTAGTTCGCAATACAGAGGTGTTACGTTTTATCGAAGGACTGGTAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTTTATTTAGGTGGATTTGACACAGCTCATGCTGCTGCTAGAGCCTATGATCGAGCTGCAATCAAATTTAGGGGAGTTGGTGCTGACATAAATTTCAATTTGAATGATTATGACGATGATCTTAAACAGACGAAGAATTTATCGAAAGAGGAGTTCGTGCAAGTACTTCGTCGACAAAGCAATGGTTTCTCAAGAGGGAGTTCAAAGTACAGAGGAGTAACACTGCACAAATGTGGCCGTTGGGAAGCTCGGATGGGACAATTCCTTGGCAAAAAGGCTTATGACAAAGCAGCTATCCAAAACAATGGAAGGGAAGCAATGACTAATTTTGAGGCCAGTACATATGAAGGAGAGATGAAATCTGCAGCCATCAATGAGGTAGGCGGCAGTCAAAATCTTGATCTCAATTTGGGCATAGCCATGCCAGGGCCTGGTCCCAGAGAAAATTGGGGGCAACTTCACTTCCCCTCATCTGTCCCTTACACTATGCAAGCTGGAATAAGTTCAAAGATGGAAACCAATGTTTCAGGAATCGGTGATCCATCTTTGAAAAGGCTATTAGCAACTGAAGAGCGCCATTCTTTATGGAATGGCATGTATCCCGCTTTCTTTTCCAATGAGGAAAGAGCAGATAGCATCAACAAAGCTCCTCCAAAAGGACTCCCCAATTGGGCGTGGCAACCTCATGGCCTGGTCACTGCTAGCCCAGTGCCACCAGTCTCTGCAGCAGCAGCAGCATCATCAGGATTCTCCATTAATTCAGCTCCCTTTCCATCAACTCGCATGTTCCCACCAAGATCTATGAACTCAATTCCCCAGAGTCTCTATTTTACTTCGCCCAATGCACCTAACGGCAACAGATCTCCATACTATTATCAGGTTAAGCCACCGCAAGCACCGACCTAG 1338 0.4462 MLDLNLNDSNSTDSTQNQNHNSPMISKNFPQESGTSNSSIVNADGDEDSCSTRDFTLSFDILKMEGSNSNNVVTKEFFPVKLQATSSSFDLSFNQNEEMKIVQAPQQVKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVGADINFNLNDYDDDLKQTKNLSKEEFVQVLRRQSNGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIQNNGREAMTNFEASTYEGEMKSAAINEVGGSQNLDLNLGIAMPGPGPRENWGQLHFPSSVPYTMQAGISSKMETNVSGIGDPSLKRLLATEERHSLWNGMYPAFFSNEERADSINKAPPKGLPNWAWQPHGLVTASPVPPVSAAAAASSGFSINSAPFPSTRMFPPRSMNSIPQSLYFTSPNAPNGNRSPYYYQVKPPQAPT 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01950 445 MobiDBLite consensus disorder prediction 1 47 - -
Mepo2g01950 445 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 71 287 - -
Mepo2g01950 445 FunFam AP2-like ethylene-responsive transcription factor 120 179 - -
Mepo2g01950 445 Pfam AP2 domain 121 169 IPR001471 GO:0003700|GO:0006355
Mepo2g01950 445 MobiDBLite consensus disorder prediction 1 46 - -
Mepo2g01950 445 CDD AP2 212 257 IPR001471 GO:0003700|GO:0006355
Mepo2g01950 445 MobiDBLite consensus disorder prediction 418 445 - -
Mepo2g01950 445 Gene3D AP2/ERF domain 120 179 IPR036955 GO:0003700|GO:0006355
Mepo2g01950 445 SMART rav1_2 121 183 IPR001471 GO:0003700|GO:0006355
Mepo2g01950 445 SMART rav1_2 213 261 IPR001471 GO:0003700|GO:0006355
Mepo2g01950 445 MobiDBLite consensus disorder prediction 418 432 - -
Mepo2g01950 445 ProSiteProfiles AP2/ERF domain profile. 121 177 IPR001471 GO:0003700|GO:0006355
Mepo2g01950 445 SUPERFAMILY DNA-binding domain 212 256 IPR016177 GO:0003677
Mepo2g01950 445 SUPERFAMILY DNA-binding domain 120 178 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01950 Mepo-Chr2 28447196 28450959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01950 1 404 AP2-EREBP Transcription Factor Family AT5G60120 46.204 4.87e-94 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo2g01950 AP2 6.2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01950 K09284 - gmx:100788303 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03766 6 49813736 49817651 Mepo2g01950 2 28447196 28450959 PCT