Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01946 ATGGAGACTTTGGGTCAAAAAGAAGGAATGCATTCTGTTGTACATGTACAAAAACTACTTGATCAATTTTCATGTGGAAATGACCATGCCTTGAAGGCAAGGAAACCATATACTATCACAAAACAGAGAGAAAAGTGGACAGATGAAGAACATAAGAAGTTCCTTGAAGCTTTAAAGTTATATGGTCGAGCCTGGCGAAAAATCGAAGAACATGTTGGCACAAAGACTGCTGTGCAGATTCGAAGTCATGCTCAGAAGTTTTTTTCTAAGATCAATCGAGACACTGATGGGAATGACACAACAATGGTGGAGACAATTGAAATTCCACCTCCAAGACCAAAACGGAAGCCGATTCATCCTTACCCACGTAAACTAGTTGAAATCGCAAAGAATGAAATCTCCAATTTGGAACAGCCACTGAGGTCTAATTCGCTTGTGTCGTTAGATTTTGGTCAAGAAAACAACTCTCCAAAATCGGTATTATCTGCAGTTGCTTCAGAAACCCTTGGTTTCTCTGATTCAGATACCCCTGCCGGAAGTTTGTCCCCGGTCTCATCCATTAGTGCTGTTCATACCAGTAGATTTCCGCTTCTCGAGTCCAAATCATCATCATCTGAGGAAGATCTGTCCCAACAAATAGATGAACTGAATGCCGGTTCAACTCATGATGTACAACCTTTAATGAAACTGGAGCTTTTCCCCAAAGAATGTGTCGCAACCAACGAAGTAGCAGCAGAAGAATCACCTTGTCAAACTCTCAAACTTTTTGGAACAACTCTGTTAGTAAAAGATACCTGCAAGTCTTCTTCAACATCAACGGACACATCTGAACCCATTCCTAGTCTTGCAACTATTGTTCCTTGGTGGACTATTTCAGACAATTCGGCCTTCAAGCCACTGCACAAGGAACCAGAAGGAAAACATCTACATTCAAATCATGGAGAATGCGAAGATAAAGAAATTCAAAAGGAAGGATCTTCTTGTGTCGGTTCTAATAGTACTAGTTCAATCAATGATGAAGAAAGCAATGAAAGATTAGATGATCAAGCCAAAAGTGATAATGTGAATTACTTTGTTGGCCACACTACACTAAGTGAAACAGTGAGACTTAAAACATTTGGAAAAGGGTTTGTACCATATAAAAGGTGCATGGCAGAAAGAGAAAGACAATGTTCGACAGTAACGGATGAGAGGAGGGAACATCAACGTATGAGGCTCTCCTTATAG 1227 0.4026 METLGQKEGMHSVVHVQKLLDQFSCGNDHALKARKPYTITKQREKWTDEEHKKFLEALKLYGRAWRKIEEHVGTKTAVQIRSHAQKFFSKINRDTDGNDTTMVETIEIPPPRPKRKPIHPYPRKLVEIAKNEISNLEQPLRSNSLVSLDFGQENNSPKSVLSAVASETLGFSDSDTPAGSLSPVSSISAVHTSRFPLLESKSSSSEEDLSQQIDELNAGSTHDVQPLMKLELFPKECVATNEVAAEESPCQTLKLFGTTLLVKDTCKSSSTSTDTSEPIPSLATIVPWWTISDNSAFKPLHKEPEGKHLHSNHGECEDKEIQKEGSSCVGSNSTSSINDEESNERLDDQAKSDNVNYFVGHTTLSETVRLKTFGKGFVPYKRCMAERERQCSTVTDERREHQRMRLSL 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01946 408 MobiDBLite consensus disorder prediction 300 349 - -
Mepo2g01946 408 CDD SANT 45 88 IPR001005 -
Mepo2g01946 408 Pfam Myb-like DNA-binding domain 43 86 IPR001005 -
Mepo2g01946 408 ProSiteProfiles Myb-like domain profile. 38 88 IPR001005 -
Mepo2g01946 408 PANTHER SWI/SNF COMPLEX-RELATED 27 340 - -
Mepo2g01946 408 MobiDBLite consensus disorder prediction 300 324 - -
Mepo2g01946 408 SMART sant 42 90 IPR001005 -
Mepo2g01946 408 ProSiteProfiles SANT domain profile. 41 92 IPR017884 -
Mepo2g01946 408 Gene3D - 45 92 - -
Mepo2g01946 408 MobiDBLite consensus disorder prediction 325 339 - -
Mepo2g01946 408 NCBIfam myb-like DNA-binding domain, SHAQKYF class 41 90 IPR006447 GO:0003677
Mepo2g01946 408 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 92 IPR017930 -
Mepo2g01946 408 SUPERFAMILY Homeodomain-like 37 93 IPR009057 -
Mepo2g01946 408 FunFam protein REVEILLE 6 isoform X1 45 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01946 Mepo-Chr2 28415196 28417835 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mepo2g01946 Myb_DNA-binding 2.8e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01946 - - gmx:778060 473.011