Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01935 ATGAAGCGTGCGAGAAGCACATACGAGTCTAGTTCTTCTAGGGTTTCGCCATCTCTCGAAGCAGGAATCATCAAAAAACTTCGGTTAGAGAATTTTATGTGCCATTCAAATCACGAAACTCAATTCGGAAGCAACGTTAATCTCATCACTGGCCAAAATGGAAGTGGTAAAAGTGCAATACTTACTGCGTTGTGTGTTGCATTTGGTTGTCGAGCTAAAGGCACGCAAAGAGCATCTACTTTGAAGGATTTCATTAAAACTGGTTCTAGTAATGCTGTCATCCATGTTGAAATTCAAAATGAGGGAGAGGATGCTTTCAAGCCTGAAATATATGGTGATGTTATCATTGTAGAACGTAGGATATCTGAATCCTCAAGCTCTATTACATTGAAAGATCAACAAGGGAAGAAAGTTTTCAGTCGAAAAGCAGATCTACAAGAAATCATCGAACATTTCAACATTGATGTGGAGAACCCGTGTGTGATTATGAGTCAAGATAAAAGCAGAGAATTTTTGCATTCTGGGAATAACAAAGATAAATTTAAGTTCTTTTACAAGGCCACACTTCTTCAGCAAGTCAATGAACTTCTTGAAAGCATTTCGGCTGAAATAACTAATGCACGTGTATTAGTTGAAGATTTAGAGGCTGCAATAAGACCTATAGAGAAAGAACTCAATGAGCTGGATGCCAAAATTAAAATGATGGAACATGTTGAACGAATTGCTGTACAGGTTCAGCAGTTAAAAAAGAAACTTGCATGGTCATGGGTTTATGATGTGGAGAAGAAACTTAAGGATCAAAGTGTAAGGATTGAAAAGCTGAAGAGTCGGGTTCCTGTATGCCAAGCTAGGATTGATAAACAACTGCATCAGCTTGAAAAATTAAGCGAAAGCTACTCTAGGAAGAAAGCTGAAATTAAAAGTATGATGACATCACAAGTTAAGCAAATGAAGGAAAGTTTAAGCCGCTCTATGTCATTGGCAAAAAAAGAAGCATTTGAACTTCAGCGAGACTGCAAATGCAAAACTAGTAATGTACAGAAGATGGTACAACAGGTCAAAAAGCTTGAACTACAAATGCAGGGTATTCATGAGCAGCATGTGAAAAATACCCAGGCCGAAGAATCTGACATGGAGGAAAAACTGAAGGGGCTTCGAGAGGAGGTTGATGCGGCTGAGTTTGAATTGAAAAGATTGAAAAAAGAAGAGGATTCATTAATGACCAACATTGATAGGCAAAAGGAAGAAATAAGCAGTATTGCTGCTAAGATCCAAGATCATGAAAGTAAATATAATGGTATCATGCATAATGTTCGTGATCTTCAACGACAACAAAGCAACAAGATCACTGCTTTTGGAGGAAATAAAGTGCTGAGTCTGTTACGTATAATTGAGAGATGTCATCAAAGGTTTAGGATGCCTCCCATTGGTCCAATTGGGGCCCATCTGAAGTTGCATAATGGTAATAAATGGGCGGTTGCTGTTGAATATGCCATTGGGAGATTGTTCAATTCTTTTATAGTGACTGATCACAAGGACTTCCGTCTTCTGAAACAATGTGCAAAGGAAGCAGACTATGGTCAACTTAAAATTATTATTTATGATTTTTCAACCCCAAGGTTGATGATACCAGAGCGCATGCGTCCTAATACAAACTATCCATCAATTCTTTCCGTCTTACAATGCGAGAATGACACTGTGCTTAATGTCTTAGTGGATCTGGGAAATGTTGAGAGACAAGTGCTTGTTAACGACTATGGTATTGGGAAAGTGGTTGCCTTTGAGAAAAGGATCCCAAATCTGAAGGAGGTCTTTACTGTGGAGGGATATAAAATGTTTTCTCGAGGTTCGGTAGAGACAATTCTTCCTCCACGGAGGAATCAATTATATGGTCGTCTAAGTAGTTCTGTTGAAGCCGACATTGAGAAACTTCGTAATGATGCGTCGAATGAACAAAAAACAGCAAATGACTATAGAAGTGAAAAAAGAAAGGCAGAGGTCAAACTTGAGGGTCTGTACGAGAAGATGAATCCTATAAAGAAATTGTGTTTATATGCTGGAAAAGATTTTGCTTCTAAGAAGCTAACTTTGGAGGATGAAATGCGTCAACAAGCGACTGAAAGTAGCTCGCCACCTCTGTCCTCGGTTGATGAAATTGTTGAAGAAATTTCAGAAATAAACCAAAAAATGAAAGAAGAGCAGGTGTTGTTAGAGAACCTTGAGCAGAGGAGGCATGAAGCAGAGGGAAAAGCAGATGATTTGAAAGTAAAATTTGACGAACTGTGTGAATCTGCGAACACTGAACTTGCTTCCCTTGAGAAATCTGAGACTGAACTTATAGAGATTGAAAGACAAATAGATGCAGTGACGGAGGCAAAGGATCATTATGAAAATTTCATGAAAACAAAGGTCCTACATGATATTAAGGAGGCAGAGGAACAGTATCTGGAGCTTACAAAAAGCCGTGAGGATAATGTTAAAAAGGCTTCCATAATTTGCCGTCAGGATGACCTTGCTTCGCTAGGAGGTTGTGATGGGAAAACCCCAGAGCAAATCAGTGCTGAAATAGAAAGTCTAAATCATACACTTAGGCGTGAGAGCAAAAGGTATTCCGAATCAATTGATGATCTAAGGATGCTATATGCGAAAAAAGAACGAAAGATTATAAAAAGGCAGCAAGTTTACAAAGCCCTTCGACAGAAATTGAATGCTTGCCATAACGCTTTAGAGTTTCGAAGGAGAAAATTTCAGACAAATGCAACTAATCTCAAGCATCAGCTTTCTTGGAAATTTAACGGCCTTTTGAAAAGGAAGGGGATCAGTGGACTTATCAAAGTTGATTATGACGAAACGACCTTATCGATTGAGGTACAAATGCCCCAAGATACATCAAACAGAGCTGTTCGAGACACAAGGGGACTTTCAGGCGGGGAGCGCTCTTTTTCAACTTTGTGCTTTGCATTAGCCCTTCATGAAATGACGGAGGCCCCATTTAGAGCAATGGATGAATTTGATGTCTTTATGGATCCAGTAAGCAGAAAAATTAGCATGGACACTCTGATTGATTTTGCTGAGGCACAAGGATCCCAGTGGATATTAATCACCCCGAATGATACTAGCTTGGTGAAGGGAGGGAACAGGGTTAAGAAGATGCAAATGGCAGCTCCCCGTGCTTGA 3177 0.3941 MKRARSTYESSSSRVSPSLEAGIIKKLRLENFMCHSNHETQFGSNVNLITGQNGSGKSAILTALCVAFGCRAKGTQRASTLKDFIKTGSSNAVIHVEIQNEGEDAFKPEIYGDVIIVERRISESSSSITLKDQQGKKVFSRKADLQEIIEHFNIDVENPCVIMSQDKSREFLHSGNNKDKFKFFYKATLLQQVNELLESISAEITNARVLVEDLEAAIRPIEKELNELDAKIKMMEHVERIAVQVQQLKKKLAWSWVYDVEKKLKDQSVRIEKLKSRVPVCQARIDKQLHQLEKLSESYSRKKAEIKSMMTSQVKQMKESLSRSMSLAKKEAFELQRDCKCKTSNVQKMVQQVKKLELQMQGIHEQHVKNTQAEESDMEEKLKGLREEVDAAEFELKRLKKEEDSLMTNIDRQKEEISSIAAKIQDHESKYNGIMHNVRDLQRQQSNKITAFGGNKVLSLLRIIERCHQRFRMPPIGPIGAHLKLHNGNKWAVAVEYAIGRLFNSFIVTDHKDFRLLKQCAKEADYGQLKIIIYDFSTPRLMIPERMRPNTNYPSILSVLQCENDTVLNVLVDLGNVERQVLVNDYGIGKVVAFEKRIPNLKEVFTVEGYKMFSRGSVETILPPRRNQLYGRLSSSVEADIEKLRNDASNEQKTANDYRSEKRKAEVKLEGLYEKMNPIKKLCLYAGKDFASKKLTLEDEMRQQATESSSPPLSSVDEIVEEISEINQKMKEEQVLLENLEQRRHEAEGKADDLKVKFDELCESANTELASLEKSETELIEIERQIDAVTEAKDHYENFMKTKVLHDIKEAEEQYLELTKSREDNVKKASIICRQDDLASLGGCDGKTPEQISAEIESLNHTLRRESKRYSESIDDLRMLYAKKERKIIKRQQVYKALRQKLNACHNALEFRRRKFQTNATNLKHQLSWKFNGLLKRKGISGLIKVDYDETTLSIEVQMPQDTSNRAVRDTRGLSGGERSFSTLCFALALHEMTEAPFRAMDEFDVFMDPVSRKISMDTLIDFAEAQGSQWILITPNDTSLVKGGNRVKKMQMAAPRA 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01935 1058 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 9 1057 - -
Mepo2g01935 1058 Coils Coil 634 675 - -
Mepo2g01935 1058 Coils Coil 197 231 - -
Mepo2g01935 1058 Coils Coil 808 828 - -
Mepo2g01935 1058 SUPERFAMILY Smc hinge domain 432 616 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Mepo2g01935 1058 Coils Coil 346 366 - -
Mepo2g01935 1058 Coils Coil 772 792 - -
Mepo2g01935 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 1050 IPR027417 -
Mepo2g01935 1058 Gene3D - 807 1055 IPR027417 -
Mepo2g01935 1058 Pfam RecF/RecN/SMC N terminal domain 24 1052 IPR003395 -
Mepo2g01935 1058 Coils Coil 368 444 - -
Mepo2g01935 1058 Coils Coil 285 305 - -
Mepo2g01935 1058 Coils Coil 716 757 - -
Mepo2g01935 1058 Gene3D - 23 222 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01935 Mepo-Chr2 28304221 28323689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01935 21 1058 Structural Maintenance of Chromosomes family AT5G07660 55.577 0.0 1131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01935 K22804 - gmx:100816916 1486.47