Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01924 ATGGAGACTGCTACTGGTGACACTTTCACTGCTCATACTTCTTCATCTACTCAAGCTTTTGTTATGAGTCCTTGTGCTGCTTGCAAGATTTTGAGGAGAAGATGTGCTGCTGATAAATGTGTTTTGGCACCTTATTTTCCTCCTACTGACCCTGCCAAGTTTACCATTGCTCATAGAGTTTTTGGTGCTAGCAACATCATCAAATTCTTACAGGAACTTCCAGAAGCTCAAAGAGCTGATGCAGTGACAAGCATGGTTTATGAGGCTAGTGCAAGAGTTAGAGACCCAGTTTATGGTTGTGCAGGAGCAATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCACAATTAGCCAAATCACAAGCTGAGGTTGTAAACTTGAAACTCCAGCAAACCAATCTTGTTGCACTATTTTTGGAAATGTCACAAAGTCCACAGGAATCACCACAAGAAATATCAGTGGATGATTTCATTCAAAGTCCTTCCCATAGCAATGGACATTATATCGGTTTGAACTTTCTTGATGACAACACTGGCCTATGCTCAGGGTGGGATACACTTTGGACATGA 573 0.4171 METATGDTFTAHTSSSTQAFVMSPCAACKILRRRCAADKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPEAQRADAVTSMVYEASARVRDPVYGCAGAICQLQKQVNELQAQLAKSQAEVVNLKLQQTNLVALFLEMSQSPQESPQEISVDDFIQSPSHSNGHYIGLNFLDDNTGLCSGWDTLWT 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01924 190 Coils Coil 104 131 - -
Mepo2g01924 190 Pfam Lateral organ boundaries (LOB) domain 24 122 IPR004883 -
Mepo2g01924 190 ProSiteProfiles LOB domain profile. 23 125 IPR004883 -
Mepo2g01924 190 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 23 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01924 Mepo-Chr2 28199964 28202216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01924 21 190 AS2 family AT2G28500 64.324 4.77e-75 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo2g01924 LOB 1.4e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01924 - - gmx:100797804 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01924 2 28199964 28202216 Mepo2g01924 2 28199964 28202216 ECH
Mepo6g03779 6 49982411 49984842 Mepo2g01924 2 28199964 28202216 PCT