Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01913 ATGGATTTGGTAGCCGGTATTAAGGAAAAATTAACATATTTCCGTATAAAAGAGCTCAAGGATGTGCTGACTCAGTTAGGACTTTCAAAACAGGGAAAGAAGCAGGATCTCGTCGATCGGATATTATCCATTCTCTCAGATGAGCAAGTTTCCAAAATATGGGCCAAGAAGAATGCTGTTGGGAAAGAGCAGGTGGCAAAACTGGTGGATGACACATATAGGAAAATGCAGATATCGGGAGCCACTGATCTAGCATCAAAGGGTCAGGTTGTGTCAGATAGTAGTAATGTGAAGGTTAAAGCTGAAGTTGAAGATTCCTTTCAAATTCAATCTACTACAACTACAAAGATTCGCTGTCTCTGTGGAAGTACATTGGAAACAGGGGATTTGATCAAGTGTGATGATGCAAGATGCCAAGTGTGGCAACACATCAGTTGCGTTATTATTCCAGAGAAACCTATGGAAGGCATCCCACCAGTTCCTGATAAATTTTATTGTGAACTATGCCGACTCAGTCGTGCAGACCCGTTTTGGGTTTCAGTATCTCATCCTTTGTTACCTGTAAAGTTGGCCACAACCAGTATTCCAACTGATGGTACCAACCCCGTGCAGTGCGTGGAGAGAACATTTCAACTCACAAGAGCAGACAAGGACATGGTATCAAAACAAGAATTTGATGTTGAGGCTTGGTGTATGCTTCTGAACGACAAGGTTCCATTCAGGATTCAATGGCCACAGTATACAGACCTGGCAGTTAATGGTCTTCCTATTCGAACAACTAATAGACCCGGTTCACAGTTGCTTGGAGCTAATGGTCGTGATGATGGTCCAATTATCACGCCGCATACAAAAGACGGAATTAATAAGATTTCCTTAACAATATGTGATGCTCGCATTTTCTGTTTAGGCGTTCGAATTGTTAGAAGGCGCAGTTTGCAACAGATCCTAAACTTAATTCCAAAGGAGTCTGACGGTGAGCCTTTTGAAGATGCTCTTGCACGTGTCTGTCGTTGTGTTGGGGGTGGAAATGCAGCTGACAATGCTGATAGCGACAGTGATTTGGAAGTGGTTTCAGATACTTTCAGTATAACCCTTCGTTGTCCGATGAGTGGTTCAAGAATGAAGATTGCCGGAAGATTCAAACCTTGCATTCACATGGGTTGTTTTGATCTTGATGTTTTTGTGGAAATGAACCAACGGTCAAGAAAGTGGCAATGTCCTATATGTCTCAAAAACTATGCATTGGAGAATATCATCATTGACCCTTATTTCAATCGTATCACTTCTATGATGCTTAATTGCGGTGAAGATGTTACAGAGGTTGAGGTGAAGCCTGATGGCTCTTGGCGTGTTAAGGCGAAGAGTGAAAGTGAACGTCTGGATTTAGGGATTCTTGGCCAATGGCATCTTCCTAATGGATCCCTTTGTACTTCTACTGCTGGAGATATCAAGAGAGTAGAAACACTGAAGCAAGTAAAACAGGAAGGTTTTTCAGATGGACCTGCTGGTTTAAAACTTGGCATTAGGAGGAATCGCAATGGGAATTGGGAAGTCAGTAAGCCCGAGACAACAAACACCTCTTCTGGTCATATATTAAAAGAGGTTTTTGGAAATCCTGAGCAAGTTGTTATTCCAATGAGCAGCAGTGGCTCCGAAAGTGGTCGGGATGGTGATGATCCCAGTGTTAACCAGGGTGGTGGTGGGCATATTGATTATTCTACTACCAATGGAATTGAGATGGATTCTCAATCTCTCAATAATGTTGATTTAGCTCGTGGATATACTGTGCATAACACATCTGCTCAGGTGGGTGGGGCAGAGATAATTGTTCTTAGCGACTCTGAAGAAGACAATGACATATTGGTGTCTCCTCCAATTGCAAATAACAACCACCAAAATGATACTGCAGATGGTTACTCCATGCCACCTCCTGGAATTGTTGACCCATACGTTGAAGATCAGAATCGCGGTGGAAGTTCATGCTTGGGGCATTTTCCTAATGAAGATGATTTTGGAATATCTTCCCTGTGGTCATTGCCTTCTGCATCTCAGGCTGGTCCAGGATTCCAATTTTTCGGTTCTGATGCAGATGCCTCTGATGCATTGGTTCATTTGCAGCATGTCCCTATTAATTGCACCTCATCACTGAACGGTTATGCATTGGCTCCCGAAAATGCTTTGGGATCTAGTAGTCTCTTACAAGATTCCTCTGCTGGACGGTCAGATGCTGACTTAAACGGTGGTTTGGTTGACAACCCATTGGCATTTGCTGGAGATGATCCCTCACTTCAGATTTTTCTCCCCACAAGACTAGCTGAGTCGTCTATGCAGAATGAATTGAGAGATCAAGCAAATGTCTCTAATGGTGTTTCCACTGAAGATTGGACATCCCTTACTCTCGGAGGTGGTGCTGGCGGTAGTAATGGCGATGCTTCCACTCAAAATGGATTGAATTCTAGACACCAAGTCCCATCCAGAGACAATGGCACAAATACTTTGGCTGATTCTGCTTCTTTGCTTCTTGGGATGAATGATGTAAGATCTGACAGAGCAAGTAGACCAAGGTCAGGTAGTCCTTTCACATTTCCTCGCCAAAAACGTTCTGTAAGGCCCCGCTTGTACCTTTCTATTGATTCGGAATCGGAATAA 2649 0.4322 MDLVAGIKEKLTYFRIKELKDVLTQLGLSKQGKKQDLVDRILSILSDEQVSKIWAKKNAVGKEQVAKLVDDTYRKMQISGATDLASKGQVVSDSSNVKVKAEVEDSFQIQSTTTTKIRCLCGSTLETGDLIKCDDARCQVWQHISCVIIPEKPMEGIPPVPDKFYCELCRLSRADPFWVSVSHPLLPVKLATTSIPTDGTNPVQCVERTFQLTRADKDMVSKQEFDVEAWCMLLNDKVPFRIQWPQYTDLAVNGLPIRTTNRPGSQLLGANGRDDGPIITPHTKDGINKISLTICDARIFCLGVRIVRRRSLQQILNLIPKESDGEPFEDALARVCRCVGGGNAADNADSDSDLEVVSDTFSITLRCPMSGSRMKIAGRFKPCIHMGCFDLDVFVEMNQRSRKWQCPICLKNYALENIIIDPYFNRITSMMLNCGEDVTEVEVKPDGSWRVKAKSESERLDLGILGQWHLPNGSLCTSTAGDIKRVETLKQVKQEGFSDGPAGLKLGIRRNRNGNWEVSKPETTNTSSGHILKEVFGNPEQVVIPMSSSGSESGRDGDDPSVNQGGGGHIDYSTTNGIEMDSQSLNNVDLARGYTVHNTSAQVGGAEIIVLSDSEEDNDILVSPPIANNNHQNDTADGYSMPPPGIVDPYVEDQNRGGSSCLGHFPNEDDFGISSLWSLPSASQAGPGFQFFGSDADASDALVHLQHVPINCTSSLNGYALAPENALGSSSLLQDSSAGRSDADLNGGLVDNPLAFAGDDPSLQIFLPTRLAESSMQNELRDQANVSNGVSTEDWTSLTLGGGAGGSNGDASTQNGLNSRHQVPSRDNGTNTLADSASLLLGMNDVRSDRASRPRSGSPFTFPRQKRSVRPRLYLSIDSESE 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01913 882 FunFam E3 SUMO-protein ligase SIZ2 337 451 - -
Mepo2g01913 882 ProSiteProfiles Zinc finger SP-RING-type profile. 350 433 IPR004181 GO:0008270
Mepo2g01913 882 SUPERFAMILY SAP domain 1 64 IPR036361 -
Mepo2g01913 882 Pfam SAP domain 14 42 IPR003034 -
Mepo2g01913 882 SMART PHD_3 118 170 IPR001965 -
Mepo2g01913 882 CDD PHD_Bye1p_SIZ1_like 118 169 - -
Mepo2g01913 882 FunFam E3 SUMO-protein ligase SIZ1 1 66 - -
Mepo2g01913 882 SMART sap_9 11 45 IPR003034 -
Mepo2g01913 882 CDD SP-RING_Siz-like 364 413 IPR031141 -
Mepo2g01913 882 ProSitePatterns Zinc finger PHD-type signature. 119 169 IPR019786 -
Mepo2g01913 882 ProSiteProfiles SAP motif profile. 11 45 IPR003034 -
Mepo2g01913 882 MobiDBLite consensus disorder prediction 778 882 - -
Mepo2g01913 882 Gene3D SAP domain 1 62 IPR036361 -
Mepo2g01913 882 PANTHER ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN 9 665 - -
Mepo2g01913 882 SUPERFAMILY FYVE/PHD zinc finger 112 173 IPR011011 -
Mepo2g01913 882 MobiDBLite consensus disorder prediction 778 838 - -
Mepo2g01913 882 MobiDBLite consensus disorder prediction 543 577 - -
Mepo2g01913 882 Pfam PHD-finger 118 170 IPR019787 -
Mepo2g01913 882 ProSiteProfiles Zinc finger PHD-type profile. 116 172 IPR019787 -
Mepo2g01913 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 175 IPR013083 -
Mepo2g01913 882 Pfam MIZ/SP-RING zinc finger 363 411 IPR004181 GO:0008270
Mepo2g01913 882 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 341 451 IPR013083 -
Mepo2g01913 882 MobiDBLite consensus disorder prediction 543 558 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01913 Mepo-Chr2 27970145 27980241 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Mepo2g01913 PHD 2.1e-07 CL0390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01913 - - gmx:100793735 1466.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03792 6 50082916 50092869 Mepo2g01913 2 27970145 27980241 PCT