Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01910 ATGGAAATTGATCTAAACAATGAAGTGATTGAGGTTGAGAAGAATGCATTGTGCCTTAAGGAATGTGAAAAAGGTTTTTGTTTCTGTATTTCTTGTTTGTCTCCTTCAACTTGTTCATCTTCAAGTTCAACTTCACCACTTGTTTCTTCTTCTTATCTTGAACTATGGCATGCTTGTGCTGGTCCTCTTACTTCACTTCCTAAGAAAGGAAATGTTGTGGTGTATTTTCCACAAGGTCACTTAGAACAATTTGCTTCTTTCTCTCCTTTTAAACAATTGGAGATACCAAACTATGATCTTCAGCCTCAGATCTTTTGCAGGGTTGTCAATGTCCAACTACTTGCCAACAAGGAGAATGATGAGGTTTATACACAAGTTACTCTGCTACCTCAGGCTGAGTTGGCAGGGATGCATATGGAGGGAAAAGAAGTTGAGGAATTAGAAGGAGATGAAGAGGGAGATGGAGGGTCACCTACAAAATCAACCCCTCACATGTTCTGCAAGACACTAACTGTCTCTGATACCAGCACTCATGGTGGATTCTCTGTGCCTCGTAGAGCTGCTGAAGATTGTTTTCCTCCTTTGGACTATAAGCTGCAAAGGCCCTCTCAAGAGCTTGTTGCCAAAGACCTGCATGGTGTGGAGTGGAAATTTCGCCATATTTATAGAGGTCAGCCAAGGCGGCATCTACTCACTACTGGCTGGAGCATTTTTGTGAACCAAAAGAATCTTGTTTCTGGTGATGCTGTGCTCTTTCTAAGGGGTGAAAATGGGGAGCTGAGATTAGGAATCAGAAGAGCTGTTAGACCTAGAAACGGTCTTCCTGAATCAATTGTTGGTAATCAGAATTGTTATCCCAATTTCCTTTCATCTGTTGCAAATGCTATATCCACCAAAAGCATGTTTCATGTTTTCTATAGTCCAAGAGCAAGTCATGCTGAATTTGTTGTTCCCTACCAAAAATATGTTAAAAGCATCAAGAATCCAGTGACCATAGGGACAAGATTCAAAATGAGAATTGAAATGGATGAATCGCCCGAAAGAAGGTGTAGTAGTGGTATGTTGATCGGAATAAATGACTTGGATCCCTATAGATGGCCAAAATCAAAATGGAGGTGCTTGATGGTAAGATGGGATGAGGATACCGAGACTAATCATCAAGACCGAGTATCGCCATGGGAGATCGATCCTTCTTCTCCTCAGCCTCCCCTAAGCATTCAGTCTTCCCCAAGATTGAAGAAACCGCGGACCGGTCTACTGGTTGCCTCGCCCAATCACCTCATCACTGGTATGAATCCTAATGCAGGAATCAGTGGAATGATGGGTTTTGAGGAGTCAGTAAGATCACCAAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTATGTCACTATACTATGGATGTGACAAAGTAACCAACCAGCCAGGTTTTGAGTTGAGCACTTCAAGTCATCATCAAAACCTTGCATCAACTGGAGTAGGAAAAGTAGTTACCTCTTCTGAGCTTATGAGTGTTCATCCTTTCAGTTATGCAGGCTTTATGGAAAGTAACAAGTTTCCAAGGGTCTTGCAAGGTCAAGAAATATGTAAACTGAAATCCCTTTCAGGAAAAGCTGATTTCAACATTGGAGCTTGGGGAACCAAGCCCAGTTTTCAATCTGCATGTTTTCCTTACGGAGATATTGGCAAAGCCAATCGAGTTAACATGTTTAGCTCAAAACAAACCAATTTCATGAGTGATAATGTCCCGTTTAACACGCCATCGATAGTGGCAGGGAACATTAGAAAAGAAGTTGGAAGATCTGGCTCTAATCTCCTTCCAAATGAGCATAAGCTGCAGGACAATGTTTCTGCTTCTGCTTCATTAGGGGATACTAATAGAAATGTTCCAAATGATAACAATGTCAAGGAAAAGGCAAATTCCTGCAAACTATTCGGCTTTCCTTTGTCTTGTGAACCTAGTAGCCAAAATTTACAAAACACAGCAAAGAGGAGTTGCACAAAGGTTCATAAGCAAGGAAGCTTAGTTGGAAGAGCCATTGATCTCTCGAGGTTGAGCGGCTACAATGATCTTCTGAGTGAACTGGAGAAACTATTTGGCATGGAAGGACTTCTTAGAGATTCTGATAAGGGATGGAGGATCCTTTACACTGACAGTGAGAATGACATAATGGTTGTGGGGGATGATCCATGGCATGAGTTTTGTGATGTGGTGTCTAAAATCCATATATACACCAAAGAAGAAGTGGAGAAGATGACATTTGGGATGATGACTAATGATGATACTCATAGCTGTTTGGATCAGGCACCAGTTATCATTGAACCTTCAAAGTCTTCCTCAGTTGGTCAGCCAGATTATTCTCCAACAGTAGTTAGAGTCTAA 2382 0.4144 MEIDLNNEVIEVEKNALCLKECEKGFCFCISCLSPSTCSSSSSTSPLVSSSYLELWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLLANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLTVSDTSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVNQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIVGNQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVTIGTRFKMRIEMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDEDTETNHQDRVSPWEIDPSSPQPPLSIQSSPRLKKPRTGLLVASPNHLITGMNPNAGISGMMGFEESVRSPKVLQGQENTGFMSLYYGCDKVTNQPGFELSTSSHHQNLASTGVGKVVTSSELMSVHPFSYAGFMESNKFPRVLQGQEICKLKSLSGKADFNIGAWGTKPSFQSACFPYGDIGKANRVNMFSSKQTNFMSDNVPFNTPSIVAGNIRKEVGRSGSNLLPNEHKLQDNVSASASLGDTNRNVPNDNNVKEKANSCKLFGFPLSCEPSSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMMTNDDTHSCLDQAPVIIEPSKSSSVGQPDYSPTVVRV 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01910 793 ProSiteProfiles PB1 domain profile. 664 746 IPR000270 GO:0005515
Mepo2g01910 793 ProSiteProfiles B3 DNA-binding domain profile. 166 268 IPR003340 GO:0003677
Mepo2g01910 793 FunFam Auxin response factor 164 268 - -
Mepo2g01910 793 SMART B3_2 166 268 IPR003340 GO:0003677
Mepo2g01910 793 SUPERFAMILY DNA-binding pseudobarrel domain 158 277 IPR015300 -
Mepo2g01910 793 MobiDBLite consensus disorder prediction 144 163 - -
Mepo2g01910 793 Gene3D - 660 753 - -
Mepo2g01910 793 Gene3D - 330 401 - -
Mepo2g01910 793 Pfam B3 DNA binding domain 166 267 IPR003340 GO:0003677
Mepo2g01910 793 FunFam Auxin response factor 659 753 - -
Mepo2g01910 793 SUPERFAMILY CAD & PB1 domains 666 743 - -
Mepo2g01910 793 FunFam Auxin response factor 329 402 - -
Mepo2g01910 793 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 51 753 IPR044835 GO:0003677|GO:0006355|GO:0009725
Mepo2g01910 793 MobiDBLite consensus disorder prediction 385 413 - -
Mepo2g01910 793 CDD B3_DNA 164 266 IPR003340 GO:0003677
Mepo2g01910 793 Gene3D - 164 268 IPR015300 -
Mepo2g01910 793 Pfam Auxin response factor 292 374 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01910 Mepo-Chr2 27943301 27949458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01910 48 793 B3 DNA Binding Superfamily AT5G60450 61.053 0.0 848
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Mepo2g01910 B3 6.6e-21 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01910 - - gmx:100783513 1219.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03793 6 50094344 50099160 Mepo2g01910 2 27943301 27949458 PCT