Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01903 ATGATGTCCAAACAAGCCTTTTCAGTTTCACCTCAATCCAATTCCACCATGAGAGCTTCCTCATCAAATCAAGTCCAACACCCAAACCCTAATCCAAATCCAGCTCCATCTAAGAAAAAAAGAAACCTACCAGGAACACCAGATCCGGAATCAGAAGTGGTTTCTATGTCACCAAAGTCATTGATGGCGACGAACCGTTTCTTATGTGAAATCTGCAACAAGGGTTTCCAAAGAGACCAGAATTTGCAGCTTCATCGGCGAGGACACAACCTACCATGGAAGCTGAAGCAAAGAGCAAACAAAGATCAAATTCGAAAGAAGGTTTATGTGTGTCCTGAGAAGACTTGTGTGCACCATGAACCTTCAAGAGCTTTGGGAGATTTGACAGGAATAAAGAAACATTATAGTAGAAAACATGGTGAGAAGAAGTGGAAGTGTGAAAAGTGTTCCAAGAAATATGCAGTTCAATCTGATTGGAAAGCTCATAGCAAGATTTGTGGAACTAGAGAGTACAAATGTGATTGTGGCACAATTTTTTCCAGGAAGGACAGCTTCATAACACATAGAGCTTTTTGTGATGCATTAACTGAACAAAGTGCAAAGATAACAACTGTTCCAGCAGCTTTAAGCAATTTTCGGAATGATCATTTGACAAATACTCAAACTCCAAGAATTCCTCACATTTTTCCTGGTTTTCAGTTTCACTCAGAATTTGTTAATTCAGCAACATCATCAGAACCACCATTGGGAAATTACACTAGCATTTCTCAACTTCATCAAAATTCTGATATAATGCAAACAATGGATGTGTTTGGATCACAACCACAGTGGCTGAATTATAATAATAATACTAATCTATCTTTGCCAATGCTACATGGAGTAATGAAACAAGAACAAGAAGAAAACAAAGATTTGTCTGCTAGTGTAATAAGCTCTTTGTACTTGAGTAGAAGTCAGAATCAGAATCAACAAGAAGCACCAAATCACTTGTCAGTAACAGCATCACTGTTGCAGAAAGAATCTCAAATGGGATCTACAAGGACAATAATTACCAATGATAACAACACAGTCTTCAACAATTTGAACCACTTTCACATTGTTCATGAGGTTCAGAAATTTTATAACAAGCAATGTGAAAGTGAAGAGTTGAATGAGTTGGTGAATTTGGAGGGAAGCAACAGCAGCACCAATCTTGGAGGTGGGTATTTATTAAATGATTCAAATTCAAACAATATGTTTGGGATTGTGAATGGTACAAAGGATTTGGAACATGTGGTATTGTCTGTGGATAAAGAGACAACAAATAGACAAATGTATGATTCAGGCTCAAGGTCAAAAGAAAAAAACCAAATGGGTTTTACAAGAGATTTTCTTGGGGTTGGAGAAAATGACTCAATGAGTAGACCTTTTTTGCAGCAAGAACTTGGTGAGTTTAATGGAATGGGATCATTAGGAAATAATCTGCAGAGCCAATATGGTAATGGACACTACTGCTAG 1497 0.3747 MMSKQAFSVSPQSNSTMRASSSNQVQHPNPNPNPAPSKKKRNLPGTPDPESEVVSMSPKSLMATNRFLCEICNKGFQRDQNLQLHRRGHNLPWKLKQRANKDQIRKKVYVCPEKTCVHHEPSRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQSDWKAHSKICGTREYKCDCGTIFSRKDSFITHRAFCDALTEQSAKITTVPAALSNFRNDHLTNTQTPRIPHIFPGFQFHSEFVNSATSSEPPLGNYTSISQLHQNSDIMQTMDVFGSQPQWLNYNNNTNLSLPMLHGVMKQEQEENKDLSASVISSLYLSRSQNQNQQEAPNHLSVTASLLQKESQMGSTRTIITNDNNTVFNNLNHFHIVHEVQKFYNKQCESEELNELVNLEGSNSSTNLGGGYLLNDSNSNNMFGIVNGTKDLEHVVLSVDKETTNRQMYDSGSRSKEKNQMGFTRDFLGVGENDSMSRPFLQQELGEFNGMGSLGNNLQSQYGNGHYC 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01903 498 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 15 468 IPR031140 -
Mepo2g01903 498 Gene3D Classic Zinc Finger 45 121 - -
Mepo2g01903 498 SUPERFAMILY beta-beta-alpha zinc fingers 66 164 IPR036236 -
Mepo2g01903 498 FunFam protein indeterminate-domain 5, chloroplastic-like 122 201 - -
Mepo2g01903 498 SMART c2h2final6 67 89 IPR013087 -
Mepo2g01903 498 SMART c2h2final6 144 164 IPR013087 -
Mepo2g01903 498 SMART c2h2final6 109 139 IPR013087 -
Mepo2g01903 498 ProSiteProfiles Zinc finger C2H2 type domain profile. 67 89 IPR013087 -
Mepo2g01903 498 MobiDBLite consensus disorder prediction 1 28 - -
Mepo2g01903 498 MobiDBLite consensus disorder prediction 1 57 - -
Mepo2g01903 498 ProSitePatterns Zinc finger C2H2 type domain signature. 69 89 IPR013087 -
Mepo2g01903 498 Gene3D Classic Zinc Finger 122 202 - -
Mepo2g01903 498 FunFam protein indeterminate-domain 12-like 46 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01903 Mepo-Chr2 27777921 27780728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01903 37 214 IDZ Gene Family AT3G45260 78.652 2.25e-110 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g01903 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01903 K25870 - gmx:100817691 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03799 6 50143781 50146643 Mepo2g01903 2 27777921 27780728 PCT