Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01895 ATGGCTTCTTCCAACAATTCAGTAGCAGAAAACAACAAGAAGAAAACCAAAAAACCTCAAACCTCAACACCTACTAGCAAAATCAAGAAAGACAACAAAAACATTGAAAAATCCAAAGAGAACAAGAATAAGAAGAAACTCAATTTCACAAACGGAAATTCCAAAGAACAGGAAGAAAGTGGAAGAAGAAAGAAACATGGAAAGGACGATGACGAAGAAGAAGATGCGAAAACGCATGTTTTTCCTATGAATCGAATTAGGACGATCTTGAAGGGTGAAATTACCGATTTGCGTGTTTCTCAGGAAGCTATTTTGGCTATTAACAATGCTGCGGAGAAGTTTCTTGAGCAATTAGCGGAGGATGCTTATGGTTGTTGTGCTCAGGATCGGAAGAAATCTTTGAGCTACAATCATCTATCGCGTGTTGTTAGTAAGAAAAGAAGATATGACTTTCTGTCCGACTTTGTTCCTGAGAAAGTGAAAGCCGAGGATGCATTAAGAGAGACAAACTCAAGAGGGAATAAAGGAGGTTAG 534 0.3839 MASSNNSVAENNKKKTKKPQTSTPTSKIKKDNKNIEKSKENKNKKKLNFTNGNSKEQEESGRRKKHGKDDDEEEDAKTHVFPMNRIRTILKGEITDLRVSQEAILAINNAAEKFLEQLAEDAYGCCAQDRKKSLSYNHLSRVVSKKRRYDFLSDFVPEKVKAEDALRETNSRGNKGG 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01895 177 MobiDBLite consensus disorder prediction 29 80 - -
Mepo2g01895 177 MobiDBLite consensus disorder prediction 1 80 - -
Mepo2g01895 177 SUPERFAMILY Histone-fold 74 157 IPR009072 GO:0046982
Mepo2g01895 177 Gene3D Histone, subunit A 31 158 IPR009072 GO:0046982
Mepo2g01895 177 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 44 174 - -
Mepo2g01895 177 Coils Coil 28 48 - -
Mepo2g01895 177 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 81 143 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01895 43 142 CCAAT-HAP5 Transcription Factor Family AT1G07980 36.000 2.44e-15 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Mepo2g01895 CBFD_NFYB_HMF 1.9e-12 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01895 - - lja:Lj3g3v3086110.3 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01895 2 27710605 27713708 Mepo2g01895 2 27710605 27713708 ECH