Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01885 ATGGCGACGACGAACAAGAAGACCAAAGCCAAAGTGGTGAAAAGCAAAGAAAAAGAGAAGAAGAAAACTTCAATTCATGACAATGGAACCAACAAAGCAGACAATAACAACAACGTTTTTGCTTCATGTTCCTTTTCTAGCCTTGGTCTTCACCAAACCTTATGTGACCAACTTCATGAAAGAATGGGTTTTGAAGCTCCAACATTGATTCAAGCTCAAGCTATTCCTGTTGTTCTCTCTGGTCGTCATGCATTGGTTAATGCTGCTACGGGCACAGGGAAGACTATTGCATACCTGGCTCCAATAATTCATCACTTGCAGAGTTATGATAAGAGAATTCTGCGCTCCGATGGAACATTTGCGTTGGTTCTTGTACCAACGCGTGAGTTATGTTTGCAGGTTCACGAAATTCTTCAGAAGTTACTGCACCGGTTTCATTGGATTGTTCCAGGATACATTATGGGTGGTGAAAGTAGATCAAAGGAGAAAGCCAGGCTACGCAAAGGCATATCAATTCTTATTGCAACTCCTGGACGCCTTTTAGATCACTTGAAGAACACATCATCTTTCGTGTACACAAATTTGCGCTGGATAATTTTCGATGAAGCTGATCGTATTTTGGAATTAGGATTTGGAAAAGAGATACAAGAAATACTAAATCTTTTAGGTTCAATGAAGCCAGGGCACGATGACCAAGAGAATGGAGCTCCAAGATCCTCTAAATTTCAAAGACAAAACCTGCTTTTATCAGCTACCTTAAATGAGAAAGTAAACCACCTTGCTAAAATTAGCTTAGAGGATCCAGTGATGATTGGTATTGATGATAAAATAATGGAACCAACGTCAAGAATTAGATTTGATAACTCAGATTGTGATGAAGACAATGAAGACACACATTCCAGTAAAGTAGCAGCAGTTGGAGCTTATAAAGTGCCTGAACAGTTAATTCAGAGATACATGAAGGTGCCTTGTGGATCACGGCTTGCTATACTTCTTTCTATTCTAAAGCATCTTTTTGAAAGGGAACCTTCACAGAAGGTTGTGCTATTCTTTTCAACATGTGATGCAGTGGACTTTCATTACTCATTGTTAACCGAATTCCTTTTTTCATCATATCCACAAACTGAAGAAGGGAACAGAACAATGTTTCTTGGATGCAAAACTCTTCGGCTACATGGTAATATGCAGCAGGAGGACAGGACAACCAGTTTTCAGGCCTTTAAAACTGAGAAATCTGCCCTTCTTTTGTCTACTGATGTTTCTGCCAGAGGCTTAGATTTTCCAAATGTTAGATGCATCATACAGTATGATTCTCCCGGAGAAGCCACTGAATATGTGCACAGAGTTGGAAGAACTGCTCGACTTGGTGAAAAAGGAGAGTCATTGTTATTTCTGCAACCATCTGAAATAGACTATTTACAAGACTTGGAGAAACATGGTGTCTCACTGGTGGAGTACCCTCTCCTCAAAGTGTTGGATAGTTTCCCACTGTCAGCACACAAGAACAACATAAAGAAATCTGTTTTCATAGACATGCATCCGTGGATCATGTGTCTCCAGAAGGCACTTGAGTCCTGCATCTCGTCCAAGCCCAAAATGGAAGAACTTGCCAAGAGAGCATTTTGCTCTTGGGTCCGTGCATACACAGCGCATCGTGGGGAGCTGAAAAGAATATTTATGGTTAAGAAACTTCACTTAGGGCACGTAGCAAAAAGCTTTGGATTGAAACAAATACCATCCTTAGTTGGAAAGTCTTTCCAAAACCAAACTAAGAAGAGAAAGAGATTTGAGAAGAAAAATGGGCCATCGAACAAGAGAAAAATTGCACGGCGTGTGACATAA 1842 0.4039 MATTNKKTKAKVVKSKEKEKKKTSIHDNGTNKADNNNNVFASCSFSSLGLHQTLCDQLHERMGFEAPTLIQAQAIPVVLSGRHALVNAATGTGKTIAYLAPIIHHLQSYDKRILRSDGTFALVLVPTRELCLQVHEILQKLLHRFHWIVPGYIMGGESRSKEKARLRKGISILIATPGRLLDHLKNTSSFVYTNLRWIIFDEADRILELGFGKEIQEILNLLGSMKPGHDDQENGAPRSSKFQRQNLLLSATLNEKVNHLAKISLEDPVMIGIDDKIMEPTSRIRFDNSDCDEDNEDTHSSKVAAVGAYKVPEQLIQRYMKVPCGSRLAILLSILKHLFEREPSQKVVLFFSTCDAVDFHYSLLTEFLFSSYPQTEEGNRTMFLGCKTLRLHGNMQQEDRTTSFQAFKTEKSALLLSTDVSARGLDFPNVRCIIQYDSPGEATEYVHRVGRTARLGEKGESLLFLQPSEIDYLQDLEKHGVSLVEYPLLKVLDSFPLSAHKNNIKKSVFIDMHPWIMCLQKALESCISSKPKMEELAKRAFCSWVRAYTAHRGELKRIFMVKKLHLGHVAKSFGLKQIPSLVGKSFQNQTKKRKRFEKKNGPSNKRKIARRVT 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01885 613 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 334 503 IPR001650 -
Mepo2g01885 613 MobiDBLite consensus disorder prediction 589 613 - -
Mepo2g01885 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 272 IPR027417 -
Mepo2g01885 613 PANTHER RNA HELICASE 16 587 - -
Mepo2g01885 613 Gene3D - 1 274 IPR027417 -
Mepo2g01885 613 CDD SF2_C_DEAD 315 465 - -
Mepo2g01885 613 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 43 72 IPR014014 GO:0003724
Mepo2g01885 613 SMART DUF4217_3 518 583 IPR025313 -
Mepo2g01885 613 Gene3D - 325 607 IPR027417 -
Mepo2g01885 613 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 199 207 IPR000629 -
Mepo2g01885 613 MobiDBLite consensus disorder prediction 1 31 - -
Mepo2g01885 613 FunFam RNA helicase 3 273 - -
Mepo2g01885 613 Pfam Domain of unknown function (DUF4217) 520 580 IPR025313 -
Mepo2g01885 613 Pfam Helicase conserved C-terminal domain 333 456 IPR001650 -
Mepo2g01885 613 SMART ultradead3 63 287 IPR014001 -
Mepo2g01885 613 CDD DEADc_DDX31 54 272 - -
Mepo2g01885 613 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 75 271 IPR014001 -
Mepo2g01885 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 81 497 IPR027417 -
Mepo2g01885 613 SMART helicmild6 358 456 IPR001650 -
Mepo2g01885 613 Pfam DEAD/DEAH box helicase 68 259 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01885 Mepo-Chr2 27607744 27614396 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01885 63 487 Eukaryotic Initiation Factors Gene Family AT5G11200 26.606 1.03e-29 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01885 K14806 - gmx:100805157 951.814