Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01866 ATGGATCATATTTTCAAGCTTTTCGCGTTTCTCATTCTCTTTGGATTAGTGAATGCTTGTTTTGCGGAAAATGGTTTTGGACATTGTGAGAGAGTTGTGAAGAGTTGGGCAAGTTCTTCACTTGATAGAGAAATTGGACAAGAAGATAAACATGCCCTTAAGGATTTGTTGTTTTTCTTGCATGTTCCTAGAACCGGAGGACGAGCTTATTTTCATTGCTTTTTGAGGAAATTGTATCCGAATTATTTGGAATGTCCTCGATCTTATGATAAGTTGCGATTTGATCCAAGCCAAGAAAAATGTAGACTGTTAAGTACACATGATGACTATAGCATGACATCTAAATTCCCAAAGGAGACAACTTCTGTGGTTACCATACTCAGGGATCCGATTAACCGAGTCTTTAGTACTTACGAATTTTCAATGGAGGTTGCGGCTAGATTTTTGGTGCATCCAAACTTGACATCTGCAACACAGATGGCTTTACGCTTGCGCTCTAAGGCTAAAGGAGTAAGCACATTGGATATCTGGCCTTGGAAGTATCTTGTTCCATGGATGAGAGAAGACCTATTTGCTAGGAGGGAAGCCAGGTATAGTAAGGGAATGAACTCTGTTGAGGGCAGTGATCCTTATGATACGAAAGATTTTGCAATGCCTTTACGAGAATACATCAATCATCCTGTGGCTTGGGATATTGTACATAATGGAGCCACATTCCAGGTTGCAGGTTTGACAAACAATTCTTATATAGCAGAAGCACATGAAGTGCGCCATTGTGTACAGAAATATAAGGTTCTTGGTAAATATGTGCTACAAGTTGCAAAGAAGAGACTTGACGGTATGTTATATGTTGGTCTTACTGAGGAGCACAGAGAATCTGCAACAATGTTTGCAAATGTGGTTGGTTCTCAGGTTATATCACAACTTAATGCACCAAACACCAGCCTGGATAGTATTGAAAATACAGAACAGAGTTCATTTTCAGATGCTGATCCTGATAGCAGTGAACATCAGAATAGCACCTCGGACAGGGGAACAAGTGAGGCTACTTCAACTGAAAAGGGAGAAGCAGCAGAATCAACTATGACTGTTGGGAAACTCATGGACTCTTATGAAACCTGTATTTCTAATTTACGGAGCTCCCAATCAGGCCGACGCATCTCCTCTTTGAAGAGGATTCCGGTGAACTTTACAAAGGAGGCACGACTTCAAGTTCCCGAAGAGGTTCTCCAGCAGCTACGGTCTCTTAACGATCTTGACTTGGAGCTCTATGAATATGCGAGAGCCATTTTCAATAAGCAACATAAAACCTCATCGCTGATCACTGAGGACAGCGCAGAGAGTAGACAGCATCCATCAACTTCGTTCACTGCAGATAAGGGCTTCCTCATCTCATCCATCATCATTCATGCGCCACCACCGCCATTAAATTTCTTTGTTTCAGTTCCGGATACTGCTAATATGAAGAACAGTTGGTTTTTTGACAAGAATTTTAATGGTGTGTCGGATGAGATTCTTGGTGACGTCGTTGAGTTTTTTGATTTTCCACTTGAAGATGTGGAAACGGATGGTGTGGAACAAGATTGGAATGATCAATTCAAACACCTTGAAGAACCATCTCTTGGTGTTTTTTCAGTACCATCATTTGAGCTACACGGCGAAACTCAAGACGAGAAACCAAAACTTGAGAACAATTTCTCTGCTGCTGAACTTTCTCATATTGACAGAAGAAATGTTGTGAATTCAAGCTTAAAAGATCGACGAGGATTACTCGGGAAGACTGCTGGACCTGTATATGGCAAAACTATTCCCATCCAAAATGTCTCCTTCAATGGAACAAATTTACGCGGATGCCGAACCTACAGCCCAGTTTCAGTTTTTGAAAGCAGTAGTTATTCCTCGGTTGAGAATTACAACTTTGAATTACCAGTGATCCCGACAAAGCGTCCTCGTGGTAAACGCCGGCGCCTCTCAAGCTTCGACAGGCTATTCTCAATTCCATTCATACCTGCTTTTCAGAAGCAGCAATCGGATAAACAGCATGCTGGTAAATCATTATGCAGAGCCCAAAAAAGGCCAAGGAAAGACAATATCTCCCAGCTCTGTGATAGCATTGAGATGAAGAGATCATCGTTACAGGAATCAATTGCTCCTAGAAAATGTACGCATTGCGAGGTAACTGAAACGCCACAATGGAGAGAGGGGCCTAAGGGTCCCAAGACCCTATGCAATGCTTGTGGAGTCCGATACAGGTCCGGTCGCCTATTTCCTGAATATCGGCCTGCAGCTAGCCCAACCTTTGAAGCATCAGTACACTCAAATTCTCACAAGAAGGTCTTGGAAATCAGGAAAAAGGTTAATCAGGAGACTGTTAAAGGTTCTTCCATGTTGTATTTATCATCAAACCTTTCAGGAATTCTCTAG 2424 0.42 MDHIFKLFAFLILFGLVNACFAENGFGHCERVVKSWASSSLDREIGQEDKHALKDLLFFLHVPRTGGRAYFHCFLRKLYPNYLECPRSYDKLRFDPSQEKCRLLSTHDDYSMTSKFPKETTSVVTILRDPINRVFSTYEFSMEVAARFLVHPNLTSATQMALRLRSKAKGVSTLDIWPWKYLVPWMREDLFARREARYSKGMNSVEGSDPYDTKDFAMPLREYINHPVAWDIVHNGATFQVAGLTNNSYIAEAHEVRHCVQKYKVLGKYVLQVAKKRLDGMLYVGLTEEHRESATMFANVVGSQVISQLNAPNTSLDSIENTEQSSFSDADPDSSEHQNSTSDRGTSEATSTEKGEAAESTMTVGKLMDSYETCISNLRSSQSGRRISSLKRIPVNFTKEARLQVPEEVLQQLRSLNDLDLELYEYARAIFNKQHKTSSLITEDSAESRQHPSTSFTADKGFLISSIIIHAPPPPLNFFVSVPDTANMKNSWFFDKNFNGVSDEILGDVVEFFDFPLEDVETDGVEQDWNDQFKHLEEPSLGVFSVPSFELHGETQDEKPKLENNFSAAELSHIDRRNVVNSSLKDRRGLLGKTAGPVYGKTIPIQNVSFNGTNLRGCRTYSPVSVFESSSYSSVENYNFELPVIPTKRPRGKRRRLSSFDRLFSIPFIPAFQKQQSDKQHAGKSLCRAQKRPRKDNISQLCDSIEMKRSSLQESIAPRKCTHCEVTETPQWREGPKGPKTLCNACGVRYRSGRLFPEYRPAASPTFEASVHSNSHKKVLEIRKKVNQETVKGSSMLYLSSNLSGIL 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01866 807 SMART GATA_3 715 765 IPR000679 GO:0006355|GO:0043565
Mepo2g01866 807 Pfam GATA zinc finger 721 754 IPR000679 GO:0006355|GO:0043565
Mepo2g01866 807 Gene3D - 712 791 IPR013088 GO:0006355|GO:0008270
Mepo2g01866 807 ProSiteProfiles GATA-type zinc finger domain profile. 715 751 IPR000679 GO:0006355|GO:0043565
Mepo2g01866 807 MobiDBLite consensus disorder prediction 319 363 - -
Mepo2g01866 807 Gene3D - 52 343 IPR027417 -
Mepo2g01866 807 FunFam GATA transcription factor 711 796 - -
Mepo2g01866 807 CDD ZnF_GATA 720 777 IPR000679 GO:0006355|GO:0043565
Mepo2g01866 807 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 718 778 - -
Mepo2g01866 807 PANTHER HEPARAN SULFATE 6-O-SULFOTRANSFERASE 3 10 441 IPR010635 GO:0008146|GO:0016020
Mepo2g01866 807 MobiDBLite consensus disorder prediction 319 358 - -
Mepo2g01866 807 ProSitePatterns GATA-type zinc finger domain. 721 746 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01866 Mepo-Chr2 27352049 27365901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01866 495 789 C2C2-Gata Transcription Factor Family AT1G08010 35.831 4.60e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Mepo2g01866 GATA 1.5e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01866 K22218 - gmx:100810026 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03830 6 50439864 50444879 Mepo2g01866 2 27352049 27365901 PCT