Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01859 ATGGTTACTCCAAAATTCATGTCAGACCTATTTGAAGGTGATCATCTTGAACTAGCTAAACTAACATCACTTAATGGTGACAACGAAATCAAGCTCAACGAAAAACAAATCGCTCCTAGAGTATTGTCACGAGTGTTCTCAGAAGACTACAAGAGAGTGAAAAGAAGAAGAAGAATATTTGATCCTAGGGGACAAACCATTCACCAATGGAACAAGATTTTCTTGGTAGCATGTTTAATTTCTTTGTTTGTGGATCCTCTCTTCTTTTATTTGCCAATAGTTCAAGATGAAGTGTGCATTGATATTGGAATAGCAGTTGAAGTTTTCCTCATAGTTATCAGATCAATCGCGGATGTCTTTTATGTCATTCACATTTTCATGAGGTTTCATACAGCATACGTTGCTCCTTCTTCTAGGGTTTTTGGGAGAGGAGAACTTGTTATTGACTCTTCTAAGATAGCTACTAGGTACTTGCACAAGGGTTTCTTCTTGGACTTTATTGCTGCCCTGCCCCTTCCTCAGGCAAGAGTTGTGACAGAAACAGCATGGGCAGGAGCTGCTTATAACTTGATGCTTTACATGTTGGCTAGTCATGTTTTAGGGGCTTGTTGGTATCTTCTATCAATTGAAAGACAAGAAGCATGCTGGAAGAGTGTCTGCAAACTGGAGGAATCATGTCAATTTGATTTTTTTGACTGCAACATGGTTAAAGATTCCCTAAGGGTATCATGGTTTGTAACAAGTAATGTCACAAATTTATGCTCACCAAATTCTCTCTTTTATCAGTTTGGTATATATGGTGATGCAGTGACATCCAAAGTTACAACCTCTGCATTCTTTAACAAGTACTTCTTTTGTCTCTGGTGGGGCCTAAGGAATCTGAGTTCTTTGGGACAAGGTCTTCTTACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATTGTTGTTGCAATCCTTGGATTGGTTCTTTTTGCATTGCTCATTGGTAATATGCAGACATACCTGCAATCAACAACCGTCCGTTTAGAAGAGTGGAGAGTCAAAAGAACAGACACAGAACAATGGATGCATCACAGACAACTACCTCAAGAACTAAGACAATCCGTGCGTAAGTACGATCAATATAAATGGATAGCTACACGAGGCGTAGATGAAGAATCTCTTCTCAGAGGTCTTCCATTGGATCTTCGAAGAGACATTAAACGCCACCTTTGTCTTGAACTAGTTCGAAGAGTTCCATTGTTTGACGCAATGGATGAGAGGATGCTAGATGCAATATGTGAAAGACTAAAGCCTGCACTATGCACCGAGAATACTTATCTAGTTCGTGAAGGCGATCCAGTGAACGAGATGCTATTCATAATAAGAGGACATCTTGATTCCTACACAACCAATGGAGGCCGCACTGGTTTCTTCAACTCATGTTGTATTGGCCCAGGTGATTTCTGTGGTGAGGAGCTATTGACATGGGCGTTGGATCCACGACCGACTATGGTAATTCCTTCTTCAACTCGAACGGTTAAAGCCATATCTGAAGTAGAAGCCTTTGCACTTATAGCAGAAGACTTGAAGTTTGTTGCATCTCAGTTTAGAAGGTTGCATAGCAAGCAACTGAGGAATAAGTTAAGGTTTCACTCGCACCAATGGAGAACGTGGGCTGCTTGTTTTATACAAGTTGCATGGAGACGTACGATACAAGAAAAGAAAGGTAGTTGTTGA 1719 0.4037 MVTPKFMSDLFEGDHLELAKLTSLNGDNEIKLNEKQIAPRVLSRVFSEDYKRVKRRRRIFDPRGQTIHQWNKIFLVACLISLFVDPLFFYLPIVQDEVCIDIGIAVEVFLIVIRSIADVFYVIHIFMRFHTAYVAPSSRVFGRGELVIDSSKIATRYLHKGFFLDFIAALPLPQARVVTETAWAGAAYNLMLYMLASHVLGACWYLLSIERQEACWKSVCKLEESCQFDFFDCNMVKDSLRVSWFVTSNVTNLCSPNSLFYQFGIYGDAVTSKVTTSAFFNKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMFAIVVAILGLVLFALLIGNMQTYLQSTTVRLEEWRVKRTDTEQWMHHRQLPQELRQSVRKYDQYKWIATRGVDEESLLRGLPLDLRRDIKRHLCLELVRRVPLFDAMDERMLDAICERLKPALCTENTYLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNSCCIGPGDFCGEELLTWALDPRPTMVIPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRNKLRFHSHQWRTWAACFIQVAWRRTIQEKKGSC 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01859 572 FunFam Cyclic nucleotide-gated ion channel 1 341 405 - -
Mepo2g01859 572 SUPERFAMILY cAMP-binding domain-like 344 542 IPR018490 -
Mepo2g01859 572 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 177 566 - -
Mepo2g01859 572 CDD CAP_ED 414 545 IPR000595 -
Mepo2g01859 572 ProSiteProfiles cAMP/cGMP binding motif profile. 414 511 IPR000595 -
Mepo2g01859 572 SMART cnmp_10 414 545 IPR000595 -
Mepo2g01859 572 Gene3D Jelly Rolls 412 532 IPR014710 -
Mepo2g01859 572 Gene3D Helix hairpin bin 341 405 - -
Mepo2g01859 572 PRINTS EAG/ELK/ERG potassium channel family signature 309 320 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo2g01859 572 PRINTS EAG/ELK/ERG potassium channel family signature 125 134 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo2g01859 572 PRINTS EAG/ELK/ERG potassium channel family signature 327 336 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo2g01859 572 PRINTS EAG/ELK/ERG potassium channel family signature 283 300 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo2g01859 572 PRINTS EAG/ELK/ERG potassium channel family signature 377 384 IPR003938 GO:0005249|GO:0006813|GO:0016020
Mepo2g01859 572 FunFam Cyclic nucleotide-gated ion channel 1 412 530 - -
Mepo2g01859 572 Pfam Ion transport protein 179 341 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Mepo2g01859 572 SUPERFAMILY Voltage-gated potassium channels 61 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01859 Mepo-Chr2 27256108 27258928 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01859 35 568 Ion Channels AT2G28260 70.619 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01859 K05391 - gmx:100786868 897.886