Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01854 ATGTCACAGCAGAATTCTCATGAGGAGACTGGGACTGAGAATAGGATAAACAACAGCCAGGAGAAATCCAAAGATAAACTAGTTGAATTGGATCAAGGGAATTCATCTGACAACGAAGGAAAAAAAGCTGAAGAAGAAGAATATGTGAGGGTAACTATGTCTGAAATACGCAAGAATGTTGAGTGTCCTATCTGCCTTGGAATCATTCGAAAAACAAGAACTTCAATGGAATGCATGCATCGCTTTTGCAAAGTGTGCATAGACAAGTGCATGCGTAGTGGGAACAATGAATGCCCTACTTGCCGCACACATTTTTCTAGTCGACGTGCACTGAGAGATGATCCAAACTATGACGCTTTGATTGCAGCTATTTACCCAAATATCGACAAGGTTGAGAAAGAGGTAACATATTAA 414 0.4034 MSQQNSHEETGTENRINNSQEKSKDKLVELDQGNSSDNEGKKAEEEEYVRVTMSEIRKNVECPICLGIIRKTRTSMECMHRFCKVCIDKCMRSGNNECPTCRTHFSSRRALRDDPNYDALIAAIYPNIDKVEKEVTY 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01854 137 SMART ring_2 62 101 IPR001841 -
Mepo2g01854 137 ProSiteProfiles Zinc finger RING-type profile. 62 102 IPR001841 -
Mepo2g01854 137 Pfam Zinc finger, C3HC4 type (RING finger) 61 101 - -
Mepo2g01854 137 CDD RING-HC_RING1-like 62 124 - -
Mepo2g01854 137 ProSitePatterns Zinc finger RING-type signature. 78 87 IPR017907 -
Mepo2g01854 137 SUPERFAMILY RING/U-box 54 116 - -
Mepo2g01854 137 PANTHER OS11G0578200 PROTEIN 8 134 IPR044592 -
Mepo2g01854 137 MobiDBLite consensus disorder prediction 14 46 - -
Mepo2g01854 137 MobiDBLite consensus disorder prediction 1 46 - -
Mepo2g01854 137 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 2 131 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01854 Mepo-Chr2 27188821 27194159 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01854 50 125 C3H Transcription Factor Family AT3G23060 31.646 6.90e-07 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01854 K10695 - mtr:120580262 262.692