Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01852 ATGGGAACTAGTCTTGTACTTATGTATAACAAAGTCATGATTCATCTTTGGTTTATTGTATGTATATGCATAAATTCATGCTATTCTCAACAACCTTACGACAAGTCTAGTTGTTATTCAAATGAAACATCACCAGGTTCAAGGTACACATGCAATTCAACACATGACACATGCAAAACATTCTTAGTATATAGAGCAAATCAAAATTTCCAAACCATTTCACAAATCTCAAACCTCTTCAACAAAAACACCAAGGAGATTCTTCACATAAACAACCTCACATCTTCTTCTCAAATACTCAAACAAGGTAAAGAAGTTCTTATTCCTATTGAATGTACATGTTCTAACCAATTTTACCAAGCCAGACTCAGCTACAAAGTTCTTGAAAGAACAACAACATTTTCAAATATTGCTTGTGAGGTTTTTGAAGGTCTATTGAAACATGTCACACTTTCCGATCAAAACAAAAATCAAGGTAATGAACCAAAATTTGGTGATGTTCTTCATGTACCTCTTACATGTTCATGTCCAAAAAATTACTCTAGTATTATGAAAGGTGTAATAAAGTACTTTGTTACATACCCTCTTATACAAGGAGATAATTTTGATAAATTGAGCAAGAAATTTAGTATCTCACTTGATGATTTCTTGGAAGCAAATCAATTGCAACCCTTTTCATCAATTTTTCCTCAGACAGTTGTTTTGATTCCAATAAGAGATGCAAATGGTCCTATAAAAATATTTGACATTCCAGATTCTCCTTCACCGCCTCCTAATTTTCTTCCAACAAATCCATTTTCACAAGAATCAACACAACCATCAAATTTGTATATTGCAGGACCGATTATAGGTTTTGTATTGTTCATTACATTGGTTGCTAGTGGATTTTATATGAAGAAATTGAGAAAAACTGATGATGTTATTGATTCCTTTAATCCAACAAACTCAACCACTTTATGGTCACCAATAAGAACCTCTACAACTTCATGCTTATCTCCTGATTTTCTTGTTGGAATTAAGTATTGTTTGCTTAATTACCATATTGAAGAAATAGAAAAAGCTACAAATTTTTTTAGTGATGTGAACAAGATTGGTGACTTTGTTTACAAGGGGTTAATCAATGGTATTGAGGTGATGATAAAGAGGATGAGATTTGAAGACACAAGTGAGGTAATTGATTTACATTCAAGAATCAATCACATTAATATTGTGAATTTAATTGGTGTTTGCTATGGTGAGAGTGATTTAATTTCATGGTCTTATTTAGTTTTTGAGTTACCTAAAAACGGTTGCTTAAGGGATTGTTTAATGGATCCATGCAATACTTTAAATTGGCATAGAAGGACACAAATAGTATTTGACATAGCAACATGTCTATACTATTTACATTATTGTTCCTTTCCTTCATATGCTCACATGAATGTGAATAGTAGAAATATATTTGTAACTGAAAATTGGAGAGGAAAATTGGCAGATGTGGGGGGTGTATCTAACAATCTTTTGCATGGGACAGTTTCACAAAAGGTTGATATTTTTGCATTTGGTGTTGTGTTGCTTGAGTTGATATCAGGAAGAGAAAAGTTTGATGGAAAATTGGTTAAAGATTGTGTTGGATTTTTGTTTGGGGAAGGTAGTGAAGGTGGTGGTTGTTTTGCAGGGTTGAGGAATTTTGTGGATCCAAATTTGAAGGATTATTCTCTTCCGGAGGCTCTTTGTTTGTGTTTTTTAGCTAAGGATTGTGTGAAAGATGATCCATTGCATAGGCCAACAGTGGATGATATCATGAAGGTTCTTGCAAAAATGAACCATGATAATAGTGTTATTTTGGAAGCAAGGGAGCCCAACTATGAAATATTGGGAAAGAGCTGGGCTTTTCAGACCTCATAA 1887 0.3328 MGTSLVLMYNKVMIHLWFIVCICINSCYSQQPYDKSSCYSNETSPGSRYTCNSTHDTCKTFLVYRANQNFQTISQISNLFNKNTKEILHINNLTSSSQILKQGKEVLIPIECTCSNQFYQARLSYKVLERTTTFSNIACEVFEGLLKHVTLSDQNKNQGNEPKFGDVLHVPLTCSCPKNYSSIMKGVIKYFVTYPLIQGDNFDKLSKKFSISLDDFLEANQLQPFSSIFPQTVVLIPIRDANGPIKIFDIPDSPSPPPNFLPTNPFSQESTQPSNLYIAGPIIGFVLFITLVASGFYMKKLRKTDDVIDSFNPTNSTTLWSPIRTSTTSCLSPDFLVGIKYCLLNYHIEEIEKATNFFSDVNKIGDFVYKGLINGIEVMIKRMRFEDTSEVIDLHSRINHINIVNLIGVCYGESDLISWSYLVFELPKNGCLRDCLMDPCNTLNWHRRTQIVFDIATCLYYLHYCSFPSYAHMNVNSRNIFVTENWRGKLADVGGVSNNLLHGTVSQKVDIFAFGVVLLELISGREKFDGKLVKDCVGFLFGEGSEGGGCFAGLRNFVDPNLKDYSLPEALCLCFLAKDCVKDDPLHRPTVDDIMKVLAKMNHDNSVILEAREPNYEILGKSWAFQTS 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01852 628 Gene3D Phosphorylase Kinase; domain 1 340 425 - -
Mepo2g01852 628 Gene3D Transferase(Phosphotransferase) domain 1 428 498 - -
Mepo2g01852 628 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 17 603 - -
Mepo2g01852 628 ProSiteProfiles Protein kinase domain profile. 347 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo2g01852 628 ProSiteProfiles LysM domain profile. 192 236 IPR018392 -
Mepo2g01852 628 CDD LysM 198 236 IPR018392 -
Mepo2g01852 628 Pfam Protein tyrosine and serine/threonine kinase 389 494 IPR001245 GO:0004672|GO:0006468
Mepo2g01852 628 Gene3D Transferase(Phosphotransferase) domain 1 499 617 - -
Mepo2g01852 628 Pfam LysM domain 198 237 IPR018392 -
Mepo2g01852 628 SUPERFAMILY Protein kinase-like (PK-like) 341 600 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01852 Mepo-Chr2 27162584 27173169 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01852 15 601 Receptor kinase-like Gene Family AT2G23770 28.302 3.12e-62 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Mepo2g01852 PK_Tyr_Ser-Thr 1.1e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01852 - - lja:Lj1g3v4047410.1 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01852 2 27162584 27173169 Mepo2g01852 2 27162584 27173169 ECH