Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01848 ATGAGGCCAGATCAATTGCATGTTGCACAACAAATTAGGAGAGACAAATTGAGGATCCAGAATCAAGAGTTTCCTAACAACAACATTGAACAATTGTTATCATTACACCAAACACCACAATCTGCAGGTTTCAATAACTTGGATCTTCTTCATCTCAGAAATGCCAACAACAACATGCTTGATGATCATGATCAAGAAGGTCTTTATTCATCTAGTCAAATGATAAATAGTTTTTCATCACCATCAAATCCTTTACACAGAAACCCTTTGGAATATTGTCATGAACTAGCTGAATCAAGTAACAATAGGGTAAATTATTATTATGAAAATCATGAAACCAATTCCAACTCTTTCTTGCCTAGTACTTCAGAAATGGCTTCTTTAATGAACCATCATGGTATTTGGGGAGGTGGGAATAGTCATAGCCCTACTGTACCTGTATTTCATGAAAATCAAGCAAATTTGTGGACAAATAGAGGTGTAACTGTTGTTGACAACAGCAACATGGGTTCTTTCTTTAGTGATTGTAACCCTCAAGGTTTATCCTTGTCACTTTCATCAACTTCATCTTCCAATTTTGAACAAGGTTCTTTAAATGCTGTGAAACCAACAACATTAATTTCTAGAGACAGTACTAGTAGTAGTAGTGGTTTCAGGAATGTTGGTCCACTTGGACCATTTACTGGCTATGCAACAATTTTGAAGAATTCAAGGTATTTAAAACCTTGTCAAGAGTTGTTAGAGGAATGTTGTTGCTTTATTAAATCCTTTGATGATAATAATAATAATAATGTTCCTAGATGGGTTTCTAGAGATGTTGTTGGTTGTTCTAGTTCTGGTGGTGTTGATGAGAAAGGTAGTAGTAATTCAGGTGGTTCATCTTCAATGTTGTATGGTTCAAAAGAGAAAGAGAATAGTGGTGATGGAGGAATTGGGAATAACTTTTGTCTTTCTTCTTCTTCTTCTTCTCGACCAGAGTGCCAAAAGAATAAGGCTCAATTACTGTACATGCACGATGAGGTTACAAGAAGGTACAAGCAATACCATCAACAAATGCAAATGGTGGTTTCATCATTTGAGTCAGTAGCTGGTCTAAGTTCAGCTACACCATACATTTCATTGGCTCTAAAGTCACTATCAAGACACTTCAGATGCCTTAAAAATGCTATCACAAATCAACTCAAACTTACATGTCAAGTATTAGGAGAGGACTTTTCAATACTACCAACAACCACAAGTAGTAGTAATAAATTTGACAGTAATAATAATATGACAAGGCTAAGGTACATGAATCATCATCATAGTTTACAAAAGAACAAATCTGGAGGGAATAGTAATGTAGACTTTGTTGAACCTCAACAACAGCATGTTTGGAGGCCCCAGAGAGGGTTACCTGAAAGATCAGTGGCAATTCTTAAAGCTTGGTTATTTGAGCATTTTCTTCATCCGTACCCTACGGACACTGATAAACACATGTTAGCTACTCAAACAGGTCTATCAAGAAACCAGGTATCGAATTGGTTCATAAATGCTCGAGTCCGTGTGTGGAAACCAATGGTTGAAGAAATACACATGCTTGAATCAAAAGGCACAGCAGAAGCTCAGAATCAGAACAATGATAAAGATGAGGCATGCAGAGTTGGAACGCATGAAAAGCAATTTCAGTGTTTGGAAATGGGGTCATCTTCAGGCATTAACAATGTTGAAAAGGTTATTACAAATGAAGAGCAATGGATTAACAATATTCAAGAGAAGAGGTCTAAATTAGAAAGTGATCAGATTGCACCAAATATGGATTCAACAGTGATGGGTTTTATGCCGTATCAACGTGGATCCGTGTCGCTGACTTTGGGTCTGAGACACGGCGTTGAAAGTGTACAACAGCAGCAACAACAGTTGCAGCACGAGGTAGAGCTTAGACATCAATTTGGAGAGCACATGATCCATGATTTTGTGGGTTAA 1962 0.3721 MRPDQLHVAQQIRRDKLRIQNQEFPNNNIEQLLSLHQTPQSAGFNNLDLLHLRNANNNMLDDHDQEGLYSSSQMINSFSSPSNPLHRNPLEYCHELAESSNNRVNYYYENHETNSNSFLPSTSEMASLMNHHGIWGGGNSHSPTVPVFHENQANLWTNRGVTVVDNSNMGSFFSDCNPQGLSLSLSSTSSSNFEQGSLNAVKPTTLISRDSTSSSSGFRNVGPLGPFTGYATILKNSRYLKPCQELLEECCCFIKSFDDNNNNNVPRWVSRDVVGCSSSGGVDEKGSSNSGGSSSMLYGSKEKENSGDGGIGNNFCLSSSSSSRPECQKNKAQLLYMHDEVTRRYKQYHQQMQMVVSSFESVAGLSSATPYISLALKSLSRHFRCLKNAITNQLKLTCQVLGEDFSILPTTTSSSNKFDSNNNMTRLRYMNHHHSLQKNKSGGNSNVDFVEPQQQHVWRPQRGLPERSVAILKAWLFEHFLHPYPTDTDKHMLATQTGLSRNQVSNWFINARVRVWKPMVEEIHMLESKGTAEAQNQNNDKDEACRVGTHEKQFQCLEMGSSSGINNVEKVITNEEQWINNIQEKRSKLESDQIAPNMDSTVMGFMPYQRGSVSLTLGLRHGVESVQQQQQQLQHEVELRHQFGEHMIHDFVG 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01848 653 SMART HOX_1 458 522 IPR001356 GO:0003677
Mepo2g01848 653 Pfam Homeobox KN domain 475 514 IPR008422 GO:0003677|GO:0006355
Mepo2g01848 653 ProSiteProfiles 'Homeobox' domain profile. 455 518 IPR001356 GO:0003677
Mepo2g01848 653 SMART prehox3 228 392 IPR006563 -
Mepo2g01848 653 Pfam Associated with HOX 233 391 IPR006563 -
Mepo2g01848 653 Gene3D - 461 523 - -
Mepo2g01848 653 FunFam BEL1-like homeodomain protein 9 461 523 - -
Mepo2g01848 653 CDD homeodomain 458 519 IPR001356 GO:0003677
Mepo2g01848 653 MobiDBLite consensus disorder prediction 281 301 - -
Mepo2g01848 653 MobiDBLite consensus disorder prediction 278 306 - -
Mepo2g01848 653 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 113 538 - -
Mepo2g01848 653 SUPERFAMILY Homeodomain-like 460 524 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01848 Mepo-Chr2 27106119 27114088 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01848 178 528 Homeobox Transcription Factor Family AT5G02030 42.818 1.65e-76 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo2g01848 POX 1.6e-42 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01848 - - tpra:123919922 885.174