Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01821 ATGCAGAGATCAGGTTATGGTCCAGATGGAATATACAGGTCCCTAAGACCTTCTCTAGCCCTTCCAAACAATCCAAACCTCTCCTTAGTCTCATTCCTCTTCACAAGCGTCTCCTCTTCCCCCAACAAAACCGCCCTCATCGACGCAGACTCTTCCCAAACACTCTCCTTCACTCAACTCAAAACTCAAGTTGCAAAACTTGCACACAGTTTACTTAACCTTGGCATAAATAAAAACGACGTCGTCCTCATCCTCTCCCCCAATAACATCCAGTTTCCTGTGTTCTTCCTAGCTGCTGCCTCCATCGGCGCTATAGTCACCACTGCAAATCCTCTTTACACCGTCGCGGAACTCTCTAAACAAATCAAGGATTCCAATCCTAAACTAGTCATCACTGTCCCTGAATTATGGAGCAAAGTGAAGAGTTTCAGTTTCAAGTTTCCTGCAATTATCATCAATTCGGGTAATGCACCGGTTTCAAATTCAAACTTCACCAGTTTTGAGGCGTTAATTGAATCCGCAGGGGAAGTAACAGAATTACCAGAAAACGACGTGAAACAGACCGACACAGCGGCACTTCTGTACTCATCAGGAACTACAGGAGTGAGCAAAGGTGTGATTCTCACACACATGAACTTCATCGCCGCGGCGTTAATGATTAACATGGACGATGATTTAGCAGGGGAATTAAACAACGTGTTCATCTGCGTTTTACCGATGTTTCATGTGTTTGGCTTGGCGGTTATAACATACGCGCAGCTAAGGAGAGGAAGTACGGTGGTTTCGATGGGGAGGTTTGAGTTGGAAGGTTTTTTGAAGGTGATTGAGAAGTATAGAGTGACGAATTTGTGGGTTGTGCCACCGATGATTCTTGCTTTGGCGAAGCAGAGTTTGGTTGTGAAATATGATGTTTCTTCGTTGAAGAGTATTGGGTCTGGTGCTGCTCCTCTTGGGAAGGAATTGATGGAGGAGTGTGCTAGACGTCTACCTCATGTTATTATTTATCAGGGTTATGGTATGACAGAAACTTGTGCCGTTGTTTCAATAGAGAATCCAAGAGTAGGTATTCGTCATTCTGGCTCAGCTGGAATGTTGGTTTCAGGAGTCGAAGCACAAATAGTGAGTGTGGACACACAGAAGCCACTCCCTCCAAAACAATTGGGGGAAATATGTGTACGAGGTCCCAACATGATGCAAGGTTATTATAACAATCTAGAGGCCACAAAACAAACTTTAGATAATGAGGGGTGGGTACATACCGGAGATCTTGGATATTTTGATGAGATTGGGCAACTTTATGTTGTTGATCGTATCAAAGAATTGATCAAATACAAAGGGTATCAGGTTGCACCAGCAGAGCTTGAAGATCTTCTTGTTTCTCACCCTGAAATACAAGATGCTGTCGTTATCCCATTTCCTGATGATGAGGCTGGTGAGGTTCCAATTGCCTATGTTGTTCGTTCACCCAACAGTTCGCTGTCCGAGGAAGAAATTCAGAAGTTTATTGCTAACCAGGTTGCACCATTCAAAAGATTGCGATGGGTGACATTCATCAACAGTGTTCCTAAGACAGCTTCAGGAAAAATTCTCAGAAGAGAGCTAATTGCAAAAGCACGATCCAAAATATAA 1629 0.4365 MQRSGYGPDGIYRSLRPSLALPNNPNLSLVSFLFTSVSSSPNKTALIDADSSQTLSFTQLKTQVAKLAHSLLNLGINKNDVVLILSPNNIQFPVFFLAAASIGAIVTTANPLYTVAELSKQIKDSNPKLVITVPELWSKVKSFSFKFPAIIINSGNAPVSNSNFTSFEALIESAGEVTELPENDVKQTDTAALLYSSGTTGVSKGVILTHMNFIAAALMINMDDDLAGELNNVFICVLPMFHVFGLAVITYAQLRRGSTVVSMGRFELEGFLKVIEKYRVTNLWVVPPMILALAKQSLVVKYDVSSLKSIGSGAAPLGKELMEECARRLPHVIIYQGYGMTETCAVVSIENPRVGIRHSGSAGMLVSGVEAQIVSVDTQKPLPPKQLGEICVRGPNMMQGYYNNLEATKQTLDNEGWVHTGDLGYFDEIGQLYVVDRIKELIKYKGYQVAPAELEDLLVSHPEIQDAVVIPFPDDEAGEVPIAYVVRSPNSSLSEEEIQKFIANQVAPFKRLRWVTFINSVPKTASGKILRRELIAKARSKI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01821 542 FunFam 4-coumarate--CoA ligase 2 440 541 - -
Mepo2g01821 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 13 439 - -
Mepo2g01821 542 Gene3D - 9 439 IPR042099 -
Mepo2g01821 542 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Mepo2g01821 542 Pfam AMP-binding enzyme 36 444 IPR000873 -
Mepo2g01821 542 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Mepo2g01821 542 SUPERFAMILY Acetyl-CoA synthetase-like 20 540 - -
Mepo2g01821 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 536 - -
Mepo2g01821 542 CDD 4CL 21 534 - -
Mepo2g01821 542 Gene3D - 440 541 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01821 Mepo-Chr2 26764395 26768767 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01821 1 542 Monolignol Biosynthesis Gene Families AT4G05160 67.033 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01821 K01904 - gmx:100808944 788.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo6g03863 6 50899423 50903902 Mepo2g01821 2 26764395 26768767 PCT