Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01817 ATGGGAAGAGCTCCATGTTGTGACAAAACAAGTGTTAAGAGAGGTCCATGGTCACCAGAAGAAGATTCAAAGCTTAAAGATTACATAGAGAAACATGGCACTGGTGGAAATTGGATTTCTCTTCCTCATAAAGCTGGTCTCAAGAGATGTGGAAAAAGTTGTAGATTGAGATGGCTAAACTATCTTAGGCCCAACATTAAGCATGGAGATTTTTCTGATGAGGAAGACAGAATAATTTGCAGTCTCTATGTTAATATTGGAAGCAGGTGGTCAATTATAGCAGCTCAATTGCCAGGTAGGACAGACAATGATATCAAGAACTATTGGAACACAAAGTTGAAGAAAAAACTCATGGCTATGCAGTTTCCTACATTACATCATCAAAGAAAACCTCAATTTCCACCTTCACCTTCTTCTCATCAATTCTTAGACTACTTCACACACACACCAACATCCTTCATAGATCTTGAAACCATTTCACTTCCTTCTAATAACTATCCAAACACAAGTTTCAACCCCTTTTACCAAAACCAAGAGTCCATGGTTAGTGTTGTTAATCCTCACATGCAATATAATTACCCTATTAAAGATAACATGTTTATGTTTGGAAGTGAAGGAAGTAGTTCATCGGATGGAAGTTGCACTCTTAGTCATGGCAAAGAAATCAAGCAAGAAGAAATTGTTTATCATCATCATTCAATGAATAGTGGTGGATTTGATGGCTACAATAATAATAACTTTATGATAAATGGTAACAATGGAAGTTTTGTTGGTGAAAGTGTTAACCAATATGAAGAAAAATCAAGTGGAGTTGGATATAGTTATAATAATGGTCAAAGTCAAATATTAAATCCATTACTAGATTATGGTCTTGAAGATATTAAGCAATTGATTAGTGGCAGCAGCAGCAAAGGTTTTCATGTTGATGATATTCATAAGAATGAAGAGATTGGTATGTACTACTTTGATTATTAA 975 0.3487 MGRAPCCDKTSVKRGPWSPEEDSKLKDYIEKHGTGGNWISLPHKAGLKRCGKSCRLRWLNYLRPNIKHGDFSDEEDRIICSLYVNIGSRWSIIAAQLPGRTDNDIKNYWNTKLKKKLMAMQFPTLHHQRKPQFPPSPSSHQFLDYFTHTPTSFIDLETISLPSNNYPNTSFNPFYQNQESMVSVVNPHMQYNYPIKDNMFMFGSEGSSSSDGSCTLSHGKEIKQEEIVYHHHSMNSGGFDGYNNNNFMINGNNGSFVGESVNQYEEKSSGVGYSYNNGQSQILNPLLDYGLEDIKQLISGSSSKGFHVDDIHKNEEIGMYYFDY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01817 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Mepo2g01817 324 PANTHER OS09G0431300 PROTEIN 1 267 - -
Mepo2g01817 324 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Mepo2g01817 324 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Mepo2g01817 324 SMART sant 67 115 IPR001005 -
Mepo2g01817 324 SMART sant 13 64 IPR001005 -
Mepo2g01817 324 FunFam Transcription factor MYB36 70 138 - -
Mepo2g01817 324 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Mepo2g01817 324 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Mepo2g01817 324 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Mepo2g01817 324 MobiDBLite consensus disorder prediction 1 21 - -
Mepo2g01817 324 Gene3D - 70 133 - -
Mepo2g01817 324 CDD SANT 16 62 IPR001005 -
Mepo2g01817 324 Gene3D - 7 68 - -
Mepo2g01817 324 FunFam Transcription factor RAX3 7 68 - -
Mepo2g01817 324 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01817 Mepo-Chr2 26721028 26722962 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01817 1 121 MYB Transcription Factor Family AT5G57620 85.950 2.50e-76 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Mepo2g01817 Myb_DNA-binding 1.7e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01817 K09422 - gmx:100779919 347.051