Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01806 ATGGTCTCTCAACCAACCTCCTCGAAAAAGCCTAGGGGTAGACCCATTGGCTCCAAGAACAAGGCCAAAGCACCCATCATTGTCAAGGAAAACACTGACAACCTCATGGAATTTATTGCCATTGAGATCCCTAAGGACAATGATGTTGTGGAGACTCTCATCAATTTGTCTCTGTCTCGTCAAGCTGGAATCACAGTGTTAAGTGCTTCTGGTCTTGTTTCGAATGTCACATTTTTTCACCCGGTATTACGTACACCTAATTTTCCAACTGAAGGAACATACAAAATGACATCCTTATTTGGAACTTACATGAATGCGACATATGGTCGTGTTCCTCCCCAATTAATAGCTGAGCCAGCATGTTCCTCCTTTTCTATTTATGTGAATGCCAATTGTGGCAATAACGTGTTTGGTGGAATCGTTGGGGGTAAGGTCAAGGCTGCCGGTGTTGTTTTCATTACAGCTGCTCTTTTGAAAAATCCAGAGTTTCATAGGGTGGATGTCTTCAATAGAATATATCAGGAGATTGAAGATGAGAACACAAGATGTGTTGGTGGTGTCACCCCAACTGCTGAAGATTTTGCGCCAAATATTGGTGTGATGGGTGTTGATTCGGCTCACCTGAATCAACAAATGCCCCCTCTTCCAGCTGATGTGATTGGCATGCAGTGGGATATCTCCCCTAGCACTTGA 693 0.4372 MVSQPTSSKKPRGRPIGSKNKAKAPIIVKENTDNLMEFIAIEIPKDNDVVETLINLSLSRQAGITVLSASGLVSNVTFFHPVLRTPNFPTEGTYKMTSLFGTYMNATYGRVPPQLIAEPACSSFSIYVNANCGNNVFGGIVGGKVKAAGVVFITAALLKNPEFHRVDVFNRIYQEIEDENTRCVGGVTPTAEDFAPNIGVMGVDSAHLNQQMPPLPADVIGMQWDISPST 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01806 230 CDD DUF296 39 154 IPR005175 -
Mepo2g01806 230 ProSiteProfiles PPC domain profile profile. 33 179 IPR005175 -
Mepo2g01806 230 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 8 174 IPR014476 GO:0003680
Mepo2g01806 230 Pfam Plants and Prokaryotes Conserved (PCC) domain 39 158 IPR005175 -
Mepo2g01806 230 MobiDBLite consensus disorder prediction 1 23 - -
Mepo2g01806 230 SUPERFAMILY AF0104/ALDC/Ptd012-like 35 166 - -
Mepo2g01806 230 Gene3D - 37 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01806 Mepo-Chr2 26542313 26543005 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01806 9 166 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.802 6.15e-25 97.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01806 - - mtr:25492374 311.227