Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01802 ATGTTAGCATTGCATTTCAAATCGTGTTTCTCTCTTCCGTTCACTACTCGCATTTCCGTCAAATCTTCTTCTTCACTCTTCCCTTCCATTCTCTCATTCCCTCTCTCTTCAACTCTTCGCCGCGCAATGTCGTCAAAACCACCACCCTCCGCCTTCGACAAACTCATGTCCGGCGCACGCGCCGCCGCCGCCAAGAAAAAACCACCACCTTCCTCATCTCCTAACAAACGAAAATCCCCTACTCCTCCATCGCCACTCAAAACCCCAGATACCGTTCAAAACCCTAATAACAACCTCAAAACCCCAGAAACCGTTGAAAAACCCGAAGAAATCGTCCATGAACAACCACCGAGCAAGATCCGAAACACATCATCATCTTCGAAGGGAATAGTCGCTGAATTGAAGGAAAAGGTTCCGCAGCTGAAGAAGAAACCGGCGAGTTTCGATCCGAGTTCGGTTGTTTGTTGGGAGAAAGACAAACCTGTTCCCTTTTTGTTTCTCTGTTTGGCGTTTGATATGATTAACGAAGAGAGTGGGAGGATTGTGATCACTGATATTGTGTGTAATTTGTTGAGGACTGTTATACATGCTACACCGGAGGATCTAGTTCCCGTTGTTTATTTGTCGGCGAATAGAATTGCGCCGGCGCATGAAGGTTTGGAATTGGGAATTGGTGATGCTTCGATTATTAAGGCCCTTGCTGAGGCGTGTGGAAGGACTGAACAGCAGATTAAGATTCAGTATAAGGACAAAGGTGACTTAGGTTTAGTTGCGAAAGCTAGCCGTTCTTCTCAGTCTATGATGCGGAAGCCTGATGCTTTGACTATTAGGAAGGTTTTCAAAACATTTCATCTTATTGCAAAGGAATCTGGAAAAGACAGTCAAGAGAAGAAAAAGAACCACATAAAGTCACTTCTTGTTGCTGCAACTGACTGTGAACCTCTATATATAATCCGTTTGCTACAGACAAAATTGCGAATTGGATATGCCGAGCAAACTCTCTTAGCTGCCTTAGGCCAAGCTGCTGTGTACACTGAAGAACATTCTAAACCGCCTCCTCAAATTCAGTCTCCTTTTGAAGAGGCTGCTAAAATTGTTAAAAAAGTCTATTCTGTTCTTCCTGATTATGACAAAATTGTGTCTGCACTCCTTACGGATGGTGTATGGGAACTTCCAAAGAAGTGTGATTTTACTCCTGGTGTTCCGGTTGGGCCTATGCTGTCAAAAGCAACCAAGGGTGTATCTGAAATTCTAAACAAGTTTCAGGATGTAGAGTTTACGTGTGAATACAAATACGATGGAGAGCGTGCTCAGATACATTTCTTGGAGAATGGCTCAGTAGAGATTTACAGTAGAAATGCTGAACGGAACACTGGGAAGTTTCCTGATGTTGTTGCTGCAGTTTCAAGGTTAAAGAAATCATCTGTAACATCATTTATCCTTGATTGTGAACTTGTTGCATATGATCGTACAAAACAGAGAATCCTTCCTTTCCAGGTGCTTAGTACTCGTGCCCGCAAAAATGTAGCTTTGAGTGACATAAAGGTTGATGTTTGTGTCTTTGCTTTTGATTTGTTGTACCTTAATGGCCAAGCACTTCTTCAGGAAAACTTGAAAATCCGCAGAGAGCATCTATATACCTCTTTCGACGAAGACTCTGGATTCTTTCAGTTTGCAACATCAACAACATCAAATGATGTTGAGGAGATACAAAAATTTCTTGACAAAGCCATTGATGCAAGTTGTGAGGGATTAATTATTAAAACATTACATGAGGACGCCACATATGAACCCTCCAAGCGGTCACTCAACTGGCTGAAACTGAAGAAAGATTATATGGAGAATATAGGGGACTCACTAGATTTGGTACCTATTGGTGCTTTCCACGGTCGTGGGAAACGTACAGGAGTGTATGGTGCTTTTCTCCTTGCGTGCTATGACAACGATAACGAGGAGTTTCAAAGCATTTGTAAGATAGGAACTGGATTCAAAGAAGAAGTGCTTGAAGAACGTTCTACTAGCCTTCGCTCTAAAGTGATTCCCAAACCAAAGACATACTATAAATGTGGAGAATCTATCAATCCTGATGTATGGTTTGACGCGAGTGAGGTGTGGGAGGTGAAAGCTGCAGACCTGACCATTAGCCCTGTTTACCGAGCTGCAGTGGGCATAGTAGATTCCAATAAGGGTATATCTCTTCGATTTCCGCGTCTAGTTCGAGTTCGGCCTGACAAAGCTCCTGAGCAGGCCTCCTCGTCTGAGCAGGTTGCTGAAATGTATAATGCTCAAAAACACAATCACAATGACAAACAGGATGACAATGAAGATGATTGA 2334 0.4293 MLALHFKSCFSLPFTTRISVKSSSSLFPSILSFPLSSTLRRAMSSKPPPSAFDKLMSGARAAAAKKKPPPSSSPNKRKSPTPPSPLKTPDTVQNPNNNLKTPETVEKPEEIVHEQPPSKIRNTSSSSKGIVAELKEKVPQLKKKPASFDPSSVVCWEKDKPVPFLFLCLAFDMINEESGRIVITDIVCNLLRTVIHATPEDLVPVVYLSANRIAPAHEGLELGIGDASIIKALAEACGRTEQQIKIQYKDKGDLGLVAKASRSSQSMMRKPDALTIRKVFKTFHLIAKESGKDSQEKKKNHIKSLLVAATDCEPLYIIRLLQTKLRIGYAEQTLLAALGQAAVYTEEHSKPPPQIQSPFEEAAKIVKKVYSVLPDYDKIVSALLTDGVWELPKKCDFTPGVPVGPMLSKATKGVSEILNKFQDVEFTCEYKYDGERAQIHFLENGSVEIYSRNAERNTGKFPDVVAAVSRLKKSSVTSFILDCELVAYDRTKQRILPFQVLSTRARKNVALSDIKVDVCVFAFDLLYLNGQALLQENLKIRREHLYTSFDEDSGFFQFATSTTSNDVEEIQKFLDKAIDASCEGLIIKTLHEDATYEPSKRSLNWLKLKKDYMENIGDSLDLVPIGAFHGRGKRTGVYGAFLLACYDNDNEEFQSICKIGTGFKEEVLEERSTSLRSKVIPKPKTYYKCGESINPDVWFDASEVWEVKAADLTISPVYRAAVGIVDSNKGISLRFPRLVRVRPDKAPEQASSSEQVAEMYNAQKHNHNDKQDDNEDD 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01802 777 MobiDBLite consensus disorder prediction 744 777 - -
Mepo2g01802 777 ProSiteProfiles ATP-dependent DNA ligase family profile. 511 647 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mepo2g01802 777 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 397 615 - -
Mepo2g01802 777 FunFam DNA ligase 405 611 - -
Mepo2g01802 777 Pfam DNA ligase N terminus 163 338 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mepo2g01802 777 Pfam ATP dependent DNA ligase domain 405 609 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Mepo2g01802 777 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 145 395 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mepo2g01802 777 CDD OBF_DNA_ligase_I 617 762 - -
Mepo2g01802 777 FunFam DNA ligase 614 773 - -
Mepo2g01802 777 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 429 437 IPR016059 GO:0003909
Mepo2g01802 777 MobiDBLite consensus disorder prediction 40 128 - -
Mepo2g01802 777 NCBIfam ATP-dependent DNA ligase 221 760 IPR000977 GO:0003910|GO:0005524|GO:0071897
Mepo2g01802 777 Gene3D - 614 776 IPR012340 -
Mepo2g01802 777 MobiDBLite consensus disorder prediction 748 762 - -
Mepo2g01802 777 Gene3D - 140 407 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Mepo2g01802 777 SUPERFAMILY Nucleic acid-binding proteins 617 763 IPR012340 -
Mepo2g01802 777 MobiDBLite consensus disorder prediction 73 89 - -
Mepo2g01802 777 CDD Adenylation_DNA_ligase_I_Euk 394 612 - -
Mepo2g01802 777 Gene3D - 415 613 - -
Mepo2g01802 777 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 68 776 - -
Mepo2g01802 777 MobiDBLite consensus disorder prediction 763 777 - -
Mepo2g01802 777 Pfam ATP dependent DNA ligase C terminal region 634 745 IPR012309 GO:0003910|GO:0006281|GO:0006310
Mepo2g01802 777 Gene3D DNA ligase/mRNA capping enzyme 434 559 - -
Mepo2g01802 777 FunFam DNA ligase 140 407 - -
Mepo2g01802 777 ProSitePatterns ATP-dependent DNA ligase signature 2. 583 609 IPR016059 GO:0003909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01802 Mepo-Chr2 26502901 26511717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01802 1 777 Core DNA Replication Machinery Family AT1G08130 65.418 0.0 1042
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01802 K10747 - gmx:100783155 1169.07