Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01799 ATGGAAACCATGCCAGAGTCATATGAATCCACTAATACACACTCTTCTTCAAATTTTGGATGCACACATTACAGAAGGAGATGCAAGATCATAGCACCATGTTGTAATGAAGTTTTTGACTGTAGGCACTGCCACAATGAAGCTAAGAACTCAGATGAGATTAACCCAGTTGATCGTCATGATATTCCGCGTCATGAAGTTAAAAAGATTATCTGCACCTTATGTGACACAGAACAAGATGTTCAACAGAACTGCATAAACTGTGGAGTATGCTTGGGAAAGTACTTTTGTGCTACATGCAAATTCTTTGATGATGATATTTCAAAGCAGCAATACCACTGTGATGAATGTGGCATCTGCAGAACTGGTGGCAGTGATAACTTTTTCCATTGCAAAAAATGTGGATGTTGCTATTCCGTCGAAATCAAAGAGGGGCATAATTGTGTAGAAAGAGCAATGCATCATAATTGTCCTATTTGCTTTGAGTATCTGTTTGATACATTGAGAGAGATCAGTGTCTTACCTTGTGGCCATACTATACATTTTGAGTGTGTTAAAGAGATGGAAAAACATCATAGGTACTCATGTCCTGTTTGCTCAAAATCTATCTGTGATATGTCAAGTGTGTGGAAGAACCTTGACCAAATGCTTTCCTCAACTCAAATGCCTGAATCATACAAAAATAAGAAGGTATGGATACTGTGCAATGATTGTGGTGTAAATTCCCATGTGCAATTCCACATTGTGGCACATAAATGTTTAAGTTGCAACTCCTACAACACAAGGCAAATACAAGGAGTACCTTCTAGCTCATGCTCATCTAGGGTGGCAGAGATGATTAGATGA 846 0.3853 METMPESYESTNTHSSSNFGCTHYRRRCKIIAPCCNEVFDCRHCHNEAKNSDEINPVDRHDIPRHEVKKIICTLCDTEQDVQQNCINCGVCLGKYFCATCKFFDDDISKQQYHCDECGICRTGGSDNFFHCKKCGCCYSVEIKEGHNCVERAMHHNCPICFEYLFDTLREISVLPCGHTIHFECVKEMEKHHRYSCPVCSKSICDMSSVWKNLDQMLSSTQMPESYKNKKVWILCNDCGVNSHVQFHIVAHKCLSCNSYNTRQIQGVPSSSCSSRVAEMIR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01799 281 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 12 265 - -
Mepo2g01799 281 Gene3D - 231 270 - -
Mepo2g01799 281 SUPERFAMILY Zinc hairpin stack 93 150 IPR037275 -
Mepo2g01799 281 SMART ring_2 157 199 IPR001841 -
Mepo2g01799 281 ProSiteProfiles Zinc finger CTCHY-type profile. 92 156 IPR017921 -
Mepo2g01799 281 SUPERFAMILY RING/U-box 156 204 - -
Mepo2g01799 281 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 230 IPR013083 -
Mepo2g01799 281 SUPERFAMILY CHY zinc finger-like 14 91 IPR037274 GO:0008270
Mepo2g01799 281 ProSiteProfiles Zinc finger RING-type profile. 157 200 IPR001841 -
Mepo2g01799 281 Pfam Ring finger domain 156 199 IPR001841 -
Mepo2g01799 281 Pfam Zinc-ribbon 204 262 IPR039512 -
Mepo2g01799 281 ProSiteProfiles Zinc finger CHY-type profile. 14 90 IPR008913 GO:0008270
Mepo2g01799 281 Pfam CHY zinc finger 21 102 IPR008913 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01799 Mepo-Chr2 26470885 26474970 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01799 19 265 C2H2 Transcription Factor Family AT3G18290 40.316 6.59e-55 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01799 K10144 - gmx:100812709 511.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo2g01799 2 26470885 26474970 Mepo2g01799 2 26470885 26474970 ECH