Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01795 ATGGAAGAGTTTGTTATGGAGGAAAAAATGGTGGGTTATGCTAAGAAAGATGCAACCTACATAGCCAAAGGAAAACGCACTAAGAGGTTAAGATTTTTATCTCCTTGTGGTGTTGTTGCTATGGCATCTAGTTGTTCAAGTGATGAGAGCAACATTGATCTTGAAGATGAAGATGATGATGAAGAAGAAGATTTGGCTAAGTGTTTGATTCTTCTTGCTCAAGGTGGAAATCATAGGGAAGATGGTGGTGTTGATGAGAATAAAAGGGAAAAGGGTAGTCATGGAAATAAAAAAATTGGTGAGACTAGCAAAAAACTTGGTTTGTATATTTATGAATGCAAAACGTGTAACCGAACTTTTCCTTCTTTTCAAGCTTTGGGTGGTCACAGGGCAAGTCACAAAAAGCCTAAGATTATGGCTGAGGAGAAAAAACCACAACCACCATCACCGCCACAGCAGCCTCGGCCACAGTCTTCATCACATGATTCGCAGTCAGTTAATCTGGTTGCGAATAGTGATGAGTTTGAAGAAGCTGAGAAACCTCGTGGGCCCATGGTTTCTTTTCAAATGGGGAATCATGGTTTGAAAGCAGCTATTAATGGGAACAAGGCCAAGATTCATGAGTGTTCCATTTGTGGTTCAGAGTTCACATCCGGACAAGCATTGGGTGGACACATGAGGAGGCATAGGGCATCAGTGGCAAACGCCGCGGCTGTCGCGGCCCCAGATGAAGGAGTTAGGCCAAGGAATATTTTACAATTGGATCTTAACCTTCCGGCACCGGAGGAGGATCTCCGCGAAACAAAGTTTCAGTTTCCGGCTACACAAAAATCAATGGTGATGGCTGCTGCTCCGGCTTTGGTGGGTTGCCATTATTAG 879 0.4369 MEEFVMEEKMVGYAKKDATYIAKGKRTKRLRFLSPCGVVAMASSCSSDESNIDLEDEDDDEEEDLAKCLILLAQGGNHREDGGVDENKREKGSHGNKKIGETSKKLGLYIYECKTCNRTFPSFQALGGHRASHKKPKIMAEEKKPQPPSPPQQPRPQSSSHDSQSVNLVANSDEFEEAEKPRGPMVSFQMGNHGLKAAINGNKAKIHECSICGSEFTSGQALGGHMRRHRASVANAAAVAAPDEGVRPRNILQLDLNLPAPEEDLRETKFQFPATQKSMVMAAAPALVGCHY 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01795 292 MobiDBLite consensus disorder prediction 127 165 - -
Mepo2g01795 292 Pfam C2H2-type zinc finger 207 231 - -
Mepo2g01795 292 Pfam C2H2-type zinc finger 111 136 - -
Mepo2g01795 292 SMART c2h2final6 207 229 IPR013087 -
Mepo2g01795 292 SMART c2h2final6 111 133 IPR013087 -
Mepo2g01795 292 Gene3D Classic Zinc Finger 108 229 - -
Mepo2g01795 292 ProSiteProfiles Zinc finger C2H2 type domain profile. 111 138 IPR013087 -
Mepo2g01795 292 MobiDBLite consensus disorder prediction 79 99 - -
Mepo2g01795 292 PANTHER ZINC FINGER PROTEIN ZAT5 45 275 - -
Mepo2g01795 292 SUPERFAMILY beta-beta-alpha zinc fingers 110 229 IPR036236 -
Mepo2g01795 292 ProSiteProfiles Zinc finger C2H2 type domain profile. 207 234 IPR013087 -
Mepo2g01795 292 ProSitePatterns Zinc finger C2H2 type domain signature. 209 229 IPR013087 -
Mepo2g01795 292 ProSitePatterns Zinc finger C2H2 type domain signature. 113 133 IPR013087 -
Mepo2g01795 292 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01795 Mepo-Chr2 26394455 26395635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01795 17 292 C2H2 Transcription Factor Family AT2G28200 41.853 1.75e-57 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mepo2g01795 zf-C2H2_6 1.9e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01795 - - cam:101512661 282.722
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo4g02499 4 33371886 33372948 Mepo2g01795 2 26394455 26395635 ECH
Mepo6g03334 6 45290652 45291718 Mepo2g01795 2 26394455 26395635 ECH
Mepo2g01795 2 26394455 26395635 Mepo2g01795 2 26394455 26395635 ECH
Mepo6g03334 6 45290652 45291718 Mepo2g01795 2 26394455 26395635 PCT