Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01783 ATGGAAATCTACAACCGCAGGTTGCTCTTACTCAACGAGGATGTTCCAATCTCAACATCCATATCACCTTTTCCTCAAATCCAACCAAACGCATCTTCACCGTCCATTTCAATCACACCCCCATCAAAAACTTTTACACCCCCTCTACAATTACAATTACCATCTCATCCAATATTCTCTTCCAACATAGCCTACATCTTCCTCCTCCTCTTCTCCACCCTTTTCTTCCTTGCCTTCATCCTCTTATCATTTCGTGAACTTTCCTTTCGACGCCAGCGTAGATATTCACCGCGGCGGGGTTTGGATTCTGCCGCGGTGAAGTCTTTGCCGGTGTGTGAGTATAAGGAAGATGTTAAGCAACCTGACTGTGTGATATGTTTGGAGGAGTTTGAAGTTTGTGAGGAGGTGAAGATGATTCCATATTGTAAGCACGTGTTTCATGCGGAGTGTATTGACACGTGGCTTTCTACGCACGTGACATGCCCTATTTGCAGGTGTGTTATTGTCGTTTGCGACGGTGGTGGGAATGTGGATGAGCATGTGGGAAGATCAACGGTTGAGAATGAAGGAGATGGAGAAGTGGGGTAG 588 0.4592 MEIYNRRLLLLNEDVPISTSISPFPQIQPNASSPSISITPPSKTFTPPLQLQLPSHPIFSSNIAYIFLLLFSTLFFLAFILLSFRELSFRRQRRYSPRRGLDSAAVKSLPVCEYKEDVKQPDCVICLEEFEVCEEVKMIPYCKHVFHAECIDTWLSTHVTCPICRCVIVVCDGGGNVDEHVGRSTVENEGDGEVG 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01783 195 CDD RING-H2_EL5-like 122 165 - -
Mepo2g01783 195 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 38 173 - -
Mepo2g01783 195 SMART ring_2 123 164 IPR001841 -
Mepo2g01783 195 SUPERFAMILY RING/U-box 108 171 - -
Mepo2g01783 195 Pfam Ring finger domain 122 165 IPR001841 -
Mepo2g01783 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 169 IPR013083 -
Mepo2g01783 195 ProSiteProfiles Zinc finger RING-type profile. 123 165 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01783 Mepo-Chr2 26220431 26221251 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01783 59 165 C3H Transcription Factor Family AT2G27940 43.796 4.27e-29 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01783 - K10664 mtr:25492360 360.147