Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01774 ATGTCTCGTCGTGGTGGCGCAAATCATTATGATCCTCGACGTGATCCTCGCCGTAACCAGCTTTCTCCGGAGACTTCTCAACAATCTTCCGTCAATGCTGCACGATCAGGCCGTGGCCGTGGTGCAAACCATCCCGATTCTCAACCTTCTCCGCCGATTTCACAACAATCATCCATCAATGCTGCACTATCAGGCCATGGCCGTGGTCGTGGTTCACGCGGCGGACACACCGTTCCATCTTCCACTCCAACTCCGGTTACAGTAACCGCTTCGTCATCAACATCAGCGCCGGTTATTTATCATCCATCTGTCGTAGCACCGGTAGTCGCTGGTTCAAGTTCGGTTTCAACGGTTCCTTCTCCGTCTCTGCCTCCGGTGACGGTTTCGACAGAAATGCTGAGTTCTGAACTTGAAAAGACGCTTACACTGGAGACGATTCCAGAGGCTTCTGCTCCGTCGTCTCAGAAGGCGATAAGGTTCCCTGACCGGCCTGGTTTCGGTCAAGTAGGAAGGAGGATTCGAGTTCGCGCCAATCATTTCCATGTGCAAGTCGCTGCTGATAAAGTTCTTCACCATTACGATGTATTGATTGCACCTGAGATTGCATCGAAGAAAGTGTCGAGGGATGTTATCAACCAGTTAGTGAAAATGCATCAGGAATCCATGCTTGGGAATCGCATTCCTGCCTATGATGGGAGGAAGAGTCTGTTTACTGCTGGTCCATTACCATTCACCTCTAAGGTTTTTGTGGTTAACTTGGTTGATGAGAACAAAGGATCCTCTTCTGGTTCTAATAAGAAAAAGCGTGAACGCGAGTTTAAGGTTACAATTAAGTTAGCTTCGAAAACGGATCTGGATCATCTTGCTCAATTTCTCCGTCGTTTGCAACTGGATTGTCCTTATGAAACCATACAAGCTCTTGACATTGCTTTGCGGGCAACTCCATCTGATATGTATACTGTTGCAGGGAGGTCATTTTTCTCTCCCAAATTGGGGCCACAGGGGCCTCTTGGCGGTGGGACAGAATATTTAAAAGGCTATTATCAAAGCCTTAGGCCAACACAAATGGGATTGTCCCTCAATATTGATGTTTCTTCGAGGGCTTTTTATGAACCGATTTGTGTGGCTGACTTTGTGTCTAAGCATTTTAAGTTGAATCTTTCAAGGCGACCGTCTGATCAAGATCGTGTCAAGATCACGAAAGCCTTGAGAGGTCTAAAGGTAAGACTATCTCACGGAGGGATCATAAGAAGTTACAAGGTGACCGGTGTCTCAAAAGAGCCACTCAGAGACCTAACGTTCATGCTTGATGACAAAGTAACTTGGAAAAAAGTTGCTGATCATTTCCATGAGAGATATGGTACTGTGTTAAAGCATCCACTTCTTCCTGCTCTCCAAGCCGGAAGTGACACGAGGCCTATGTATTTTCCAATGGAGCTTTGTCAAATTGAGCCTGGACAAAGGTACTCCAAAAGATTGAACGAAGAGCAAGTAACTAATCTTTTAAGGGCCAACTGTCAGCGTCCCCATCAGAGGGAAAGTGATATTAAAAATATCGTGAAGCGGCACCATTTCAACATAGACAAAGTTGTGCATGAGTTTGGTATCAATATAAGGGAGGAACTTGCTTTGGTTGATGCCCGTGTTTTGCCTCCCCCAACGCTCAAATATGGTGGAGAGTCAAAAATTGACCCCACGATGGGACAATGGAATATGATGAAACATAAAGTGGTTGATGGTGGCACAGTGCAATTCTGGAGTTGCCTTTGCTTTTCTAGATTGAACCCAACTCAATTTTGTGCGGAGTTGGCTAATATGTGTCAAGCCAAGGGAATACATTTCAACAGAGATCCTTTGGTACCTATAGCCCCCGCCAATTCAAATCAAATTGAGAAAGAGCTTGAGGAATTCGACAAGAACTGCAAGGATAAACTTAGTAGTACAAACCAGAAAGGAAGGCTGCAACTGTTGATAGTAATTTTGCCTGATTTCAAGGGGAAGTTTTATGACCAAATAAAGAGTGAATGTGAAACTAAATTAGGAATTGTGACTCAATGTTGCGAGCCAAGGAAAGTGGCAAAGATGAATAAAATGTATCTGGAGAATTTGGCTTTAAAGATTAATGTGAAGGTTGGTGGTCGTAACACCGTGCTGAATGATGCAGTTATATATAATATTCCCCTAGTAACTGATATACCAACTATAATATTTGGAGCGGATGTAACACACCCTCATCCAGGAGAAGACTCAAGTCCTTCTATAGCTGCAGTGGTGGCATCCATGGATTGGCCTTGCGTCACAAAGTACAGGGGAATGGTTTCTGCCCAGATTCATCGGGAAGAAATTATTCAAGATCTTTATACAGAAACAAAACATCCTCAAAAGGGAACTGTGCCTGGTGGAATGATAAGGGAGTTACTCCTGGCTTTCTATAGATCAAATAAGAAACGGCGGCCTGAGAGGATCATATTTTACAGAGATGGAGTAAGTGAAGGGCAGTTTAGTCAGGTTTTGCTGTATGAGATGGATGCAATTTGGAAGGCTTGTGCCTCATTTGAGGAGGGGTATCTACCAAAAGTTACGTTTGTGGTTGTCCAAAAGAGACATCACACCCGATTCTTTCCGGTCAGTTCTGATCAGACAGATAAAAGTGGAAACATAATGCCAGGAACTGTGGTAGACACAACCATTTGCCATCCCAGGGAATTTGATTTTTATCTGAACAGCCATGCTGGGATTCAAGGGACTAGTCGACCAACTCATTATCATGTGTTGTTTGATGAAAATAACTTCAGTGCAGATCAGTTACAGGGTTTAACCAATAACTTATGTTACACTTATGCAAGGTGTACTCGGTCGGTGTCAATAGTTCCTCCTGCATATTATGCACACTTGTTAGCATCCCGAGCTCGATGCTACCTTAAAGAAGTTGACACTTCTGAGTCTGGTTCTGCAAGTGGTAACAGAAGTACCACCAACTTTGTGTCGACACTGCCCTCCATAGTGGAAAATGTCAAGGAAGTTATGTTTTACTGTTGA 3039 0.4409 MSRRGGANHYDPRRDPRRNQLSPETSQQSSVNAARSGRGRGANHPDSQPSPPISQQSSINAALSGHGRGRGSRGGHTVPSSTPTPVTVTASSSTSAPVIYHPSVVAPVVAGSSSVSTVPSPSLPPVTVSTEMLSSELEKTLTLETIPEASAPSSQKAIRFPDRPGFGQVGRRIRVRANHFHVQVAADKVLHHYDVLIAPEIASKKVSRDVINQLVKMHQESMLGNRIPAYDGRKSLFTAGPLPFTSKVFVVNLVDENKGSSSGSNKKKREREFKVTIKLASKTDLDHLAQFLRRLQLDCPYETIQALDIALRATPSDMYTVAGRSFFSPKLGPQGPLGGGTEYLKGYYQSLRPTQMGLSLNIDVSSRAFYEPICVADFVSKHFKLNLSRRPSDQDRVKITKALRGLKVRLSHGGIIRSYKVTGVSKEPLRDLTFMLDDKVTWKKVADHFHERYGTVLKHPLLPALQAGSDTRPMYFPMELCQIEPGQRYSKRLNEEQVTNLLRANCQRPHQRESDIKNIVKRHHFNIDKVVHEFGINIREELALVDARVLPPPTLKYGGESKIDPTMGQWNMMKHKVVDGGTVQFWSCLCFSRLNPTQFCAELANMCQAKGIHFNRDPLVPIAPANSNQIEKELEEFDKNCKDKLSSTNQKGRLQLLIVILPDFKGKFYDQIKSECETKLGIVTQCCEPRKVAKMNKMYLENLALKINVKVGGRNTVLNDAVIYNIPLVTDIPTIIFGADVTHPHPGEDSSPSIAAVVASMDWPCVTKYRGMVSAQIHREEIIQDLYTETKHPQKGTVPGGMIRELLLAFYRSNKKRRPERIIFYRDGVSEGQFSQVLLYEMDAIWKACASFEEGYLPKVTFVVVQKRHHTRFFPVSSDQTDKSGNIMPGTVVDTTICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENNFSADQLQGLTNNLCYTYARCTRSVSIVPPAYYAHLLASRARCYLKEVDTSESGSASGNRSTTNFVSTLPSIVENVKEVMFYC 1012
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01774 1012 Gene3D - 726 1012 IPR036397 GO:0003676
Mepo2g01774 1012 Gene3D paz domain 367 489 - -
Mepo2g01774 1012 MobiDBLite consensus disorder prediction 75 90 - -
Mepo2g01774 1012 Pfam Argonaute linker 1 domain 323 371 IPR014811 -
Mepo2g01774 1012 MobiDBLite consensus disorder prediction 1 20 - -
Mepo2g01774 1012 FunFam Argonaute 10 549 719 - -
Mepo2g01774 1012 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 152 976 - -
Mepo2g01774 1012 ProSiteProfiles Piwi domain profile. 656 975 IPR003165 GO:0003676
Mepo2g01774 1012 FunFam protein argonaute 10-like 725 1012 - -
Mepo2g01774 1012 SUPERFAMILY Ribonuclease H-like 650 975 IPR012337 -
Mepo2g01774 1012 CDD Piwi_ago-like 529 974 IPR045246 -
Mepo2g01774 1012 Gene3D - 549 720 - -
Mepo2g01774 1012 SUPERFAMILY PAZ domain 368 525 IPR036085 GO:0005515
Mepo2g01774 1012 SMART Piwi_a_2 656 975 IPR003165 GO:0003676
Mepo2g01774 1012 MobiDBLite consensus disorder prediction 21 36 - -
Mepo2g01774 1012 Pfam Argonaute linker 2 domain 511 557 IPR032472 -
Mepo2g01774 1012 MobiDBLite consensus disorder prediction 1 90 - -
Mepo2g01774 1012 Pfam N-terminal domain of argonaute 171 311 IPR032474 -
Mepo2g01774 1012 MobiDBLite consensus disorder prediction 47 63 - -
Mepo2g01774 1012 Pfam Piwi domain 657 975 IPR003165 GO:0003676
Mepo2g01774 1012 SMART DUF1785_2 320 372 IPR014811 -
Mepo2g01774 1012 Pfam PAZ domain 396 502 IPR003100 GO:0005515
Mepo2g01774 1012 ProSiteProfiles PAZ domain profile. 373 485 IPR003100 GO:0005515
Mepo2g01774 1012 CDD PAZ_argonaute_like 372 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01774 Mepo-Chr2 26079581 26086149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01774 109 1012 Eukaryotic Initiation Factors Gene Family AT1G48410 56.564 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01774 K11593 - gmx:100799033 1144.8