Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01773 ATGTCTCGTCGCGGTGGCGCTAACCATCCCGATCCTCGCCGGAATCAACCTTCTCCGGCAATTTCACAGTCATCCGTCAATGCTGCAGGATCAGGCCGTGGCTGTCGTTCCAGTGGAGGTCGTGGTTCACGCGGCGGACACACCGTTCCATCTTCCGCTCCGTCTCCGGTTCCGGTAACCGCTGCTTCGTCAACCGCAGCTCCCGTTGTTGCTAGTTCGAGTTCTGCTCCAACGCGTCCGTCTCCAGCTCCGGTGACGGTTTCAACTGAAGTGCTGAGTTCTGAGGTTGAAAAGCTTACGTTAGAGTCGACTCCGGCGGCGGCTTCAGCGCCGTCGTCTCAGAAGGCGGTGAGGTTTCCTAACAGACCTGGCATCGGTCGATTAGGAAAGAAGATTCAAGTTCGTGCTAATCATTTCCAGTTGCAAGTTGTTGATAAGGATCTTCATCACTACGATGTATCATTTGCGCCAGAGATTACTTCAAAGAAAGTGTCGAGGGATGTTATCAACCAGTTAGTGAAAATGCATCAGGAATCCATGCTTGGGAATCGCATTCCTGCCTATGATGGGAGGAAGAGTCTGTTTACTGCTGGTCCTTTACCCTTTACGTCGAAGGTTTTTGTGATTAACTTGGTTGATGAGAACAAAGGACCCTCTTCTGGTTCTGACACGAAAAAGCGTGAACGCGAGTTTAAGGTTACAATTAAGTTTGCTTCACAGACGGACCTAAACCACCTTACCCAGTTTCTCCGTCGTTTGCAGCTGGATTGTCCTTATGAAACCATACAAGCTCTTGATATTGCTTTGCGGGCAACTCCATCTGAAATGTATACCGTTTCAGGGAGGTCATTTTTCTCCCCCAGTTTGGGGGCACAGGGGCCTCTTGGCGGTGGGACCGAATATTGGAGAGGCTATTATCAAAGCCTTAGGCCCACGCAGATGGGATTGTCCCTCAATATTGATGTTTCTTCGAGGGCTTTTTATGAACCGATTCGTGTGACTGACTTTATTTCTAAGAATTTTAGGTTGAATTTTTCAAGGCCACTGTCTGATCAAGATCGTGTCAAGATCAAGAGAGCCTTGAGAGGTCTTAGGGTAAGAACATCTCACGGAGGTAACATAAGGAGTTACAGGGTGACCGGTGTCTCAAAAGAGCCCCTCAGAGATCTAACGTTCAAGCTTGATGACCAAGTAACTCGGAAAAAAATTTCTGATTATTTCTATGAGAAATATGAAATTGTGTTACAGTATCCACTTCTTCCTGCTCTCCAAGCTGGAAGTGACATGAGGCCTATGTTTATTCCAATGGAGCTTTGTCAAATTGAGTCTGGACAAAGGTACTCCAAAAGATTAAACGAAGAGCAAGTAACAAACCTTTTAAGGGCCACCTGTCAGCGTCCTCATCAGAGAGAAAAAGATATTAAAAATATTGTGAAGCAGCACTGTTTCAACGGAGATAAAGTCGTAAGGGAGTTTGGTATCAATGTAAGGGAGGAACTTGCATTGGTTGATGCCCGTGTTTTGCCTCCCCCGATGCTCAAATATCATGGAAATGGTGGAGATTCAAAAATTGAACCCAGGATGGGTCAATGGAATATGATTAGACATAAAGTGGTTAATGGTGGCACGGTGCAATATTGGAGTTGCCTTAGCTTTTCTAGATTGGACCCAACTCAATTTTGTGCAGAGTTGGTTAATATGTGTCAAGCCAAGGGAATAATTTTCAACAGAGATCCTTTGGTACCTATTGCCCCAGCCAATTCAAATCAAATTGCAAAAGAGCTTGAGGAATTCGACAAGAACTGCAAGGATAAACTTAATAGTACAAACCAGAAAGGAAGGCTGCAACTGTTGATAGTAATTTTGCCTGATTTCAAGGGGAAGTTTTATGATGAAATAAAGCGTGTATGTGAAACAAGAATAGGAATTGTGACTCAATGTGCTAAGCCAAATCAAGCAGCAAAGATGAGTAAGCAGTATCTGGAGAATTTGGCTTTGAAGATTAATGTTAAGGTTGGTGGCCGCAACACGGTATTGAATGATGCTATTGAAAGAAAAATTCCTCTTTTAACTGATAAACCAACGATAATATTTGGTGCGGATGTAACACATCCTCAGCCAGGAGAAGATTCATCTCCTTCAATAGCTGCAGTGGTGGCATCCATGGATTGGCCTCATGTCACAAACTACAGGGGACTTATTTCTGCCCAGTCTCACCGGGAAGAAATTATTCAAGATCTGTACAAAACAACAGAACACCCACAGAGAGGAATTGTGCATAGTGGAATGATAAGGGAGTCACTTCTGGCTTTCTATCGATCAAATAGGTGTAAGCCTGACAGGATTATATTTTACAGAGATGGAGTAAGTGAAGGGCAGTTTAGTCAGGTTTTGCTTTATGAGATGGATGCGATTAGAAAGGCTTGTGTATCACTAGAAAGCAATTATCTGCCAAGAGTTACTTTTGTGGTGGTCCAAAAGAGACATCACACCCGTCTCTTTCCCACCAGTAACGATCAGACAGATCGAAGTGGAAATATAATGCCAGGAACTGTGGTAGACACATCCATTTGCCATCCTAGGGAATTTGATTTTTATCTGAACAGCCATGCTGGGATTCAAGGGACTAGTCGACCAACTCATTATCATGTGTTGTTTGATGAAAATGGCTTCAGTGCTGATCAGTTACAGAGTTTGACCAATAACTTATGTTACACTTATGCAAGGTGTACTCGTTCAGTGTCGATAGTTCCTCCAGCTTACTATGCACACCTATTAGCGTTCCGAGCTCGCTACTACCTGAATGAAGTTGACACTTCTGATTCTGGTTCTGCAACTGGTAACAGAAGTACTACAAACTTTGTGTCGACCCTGCCCTCCGTAATGGAAAATGTCAAGGACGTTATGTTCTACTGTTGA 2919 0.4406 MSRRGGANHPDPRRNQPSPAISQSSVNAAGSGRGCRSSGGRGSRGGHTVPSSAPSPVPVTAASSTAAPVVASSSSAPTRPSPAPVTVSTEVLSSEVEKLTLESTPAAASAPSSQKAVRFPNRPGIGRLGKKIQVRANHFQLQVVDKDLHHYDVSFAPEITSKKVSRDVINQLVKMHQESMLGNRIPAYDGRKSLFTAGPLPFTSKVFVINLVDENKGPSSGSDTKKREREFKVTIKFASQTDLNHLTQFLRRLQLDCPYETIQALDIALRATPSEMYTVSGRSFFSPSLGAQGPLGGGTEYWRGYYQSLRPTQMGLSLNIDVSSRAFYEPIRVTDFISKNFRLNFSRPLSDQDRVKIKRALRGLRVRTSHGGNIRSYRVTGVSKEPLRDLTFKLDDQVTRKKISDYFYEKYEIVLQYPLLPALQAGSDMRPMFIPMELCQIESGQRYSKRLNEEQVTNLLRATCQRPHQREKDIKNIVKQHCFNGDKVVREFGINVREELALVDARVLPPPMLKYHGNGGDSKIEPRMGQWNMIRHKVVNGGTVQYWSCLSFSRLDPTQFCAELVNMCQAKGIIFNRDPLVPIAPANSNQIAKELEEFDKNCKDKLNSTNQKGRLQLLIVILPDFKGKFYDEIKRVCETRIGIVTQCAKPNQAAKMSKQYLENLALKINVKVGGRNTVLNDAIERKIPLLTDKPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPHVTNYRGLISAQSHREEIIQDLYKTTEHPQRGIVHSGMIRESLLAFYRSNRCKPDRIIFYRDGVSEGQFSQVLLYEMDAIRKACVSLESNYLPRVTFVVVQKRHHTRLFPTSNDQTDRSGNIMPGTVVDTSICHPREFDFYLNSHAGIQGTSRPTHYHVLFDENGFSADQLQSLTNNLCYTYARCTRSVSIVPPAYYAHLLAFRARYYLNEVDTSDSGSATGNRSTTNFVSTLPSVMENVKDVMFYC 972
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01773 972 Pfam PAZ domain 356 460 IPR003100 GO:0005515
Mepo2g01773 972 SUPERFAMILY Ribonuclease H-like 611 936 IPR012337 -
Mepo2g01773 972 Pfam Argonaute linker 2 domain 469 515 IPR032472 -
Mepo2g01773 972 MobiDBLite consensus disorder prediction 15 32 - -
Mepo2g01773 972 FunFam Argonaute 10 507 680 - -
Mepo2g01773 972 FunFam protein argonaute 10-like 686 972 - -
Mepo2g01773 972 MobiDBLite consensus disorder prediction 102 116 - -
Mepo2g01773 972 CDD PAZ_argonaute_like 330 441 - -
Mepo2g01773 972 MobiDBLite consensus disorder prediction 1 88 - -
Mepo2g01773 972 Pfam Argonaute linker 1 domain 281 329 IPR014811 -
Mepo2g01773 972 Gene3D - 507 681 - -
Mepo2g01773 972 SMART Piwi_a_2 617 935 IPR003165 GO:0003676
Mepo2g01773 972 ProSiteProfiles PAZ domain profile. 331 443 IPR003100 GO:0005515
Mepo2g01773 972 SMART PAZ_2_a_3 331 462 IPR003100 GO:0005515
Mepo2g01773 972 Gene3D - 687 972 IPR036397 GO:0003676
Mepo2g01773 972 Pfam N-terminal domain of argonaute 130 269 IPR032474 -
Mepo2g01773 972 Pfam Piwi domain 618 934 IPR003165 GO:0003676
Mepo2g01773 972 CDD Piwi_ago-like 487 934 IPR045246 -
Mepo2g01773 972 SUPERFAMILY PAZ domain 131 484 IPR036085 GO:0005515
Mepo2g01773 972 Gene3D paz domain 325 447 - -
Mepo2g01773 972 MobiDBLite consensus disorder prediction 44 88 - -
Mepo2g01773 972 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 114 936 - -
Mepo2g01773 972 SMART DUF1785_2 278 330 IPR014811 -
Mepo2g01773 972 ProSiteProfiles Piwi domain profile. 617 935 IPR003165 GO:0003676
Mepo2g01773 972 MobiDBLite consensus disorder prediction 102 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01773 Mepo-Chr2 26060729 26066801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01773 67 972 Eukaryotic Initiation Factors Gene Family AT1G48410 56.777 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01773 K11593 - gmx:100799033 1221.45