Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01760 ATGGAGAAGGGTGGTGGGAAACCGAGAGGTCGTCCGAGGAAACGACGAAAGGAGGAGGAAGAGAAGAAGGACGGGAAATTGGTTAATGAAGCTAAGAGGCAAGCAGTTGAGACGAAACCGATTCCGTTGGTTGGGAGGTATGTGCTGAAAGAGTTTCCTAGAAATGGTGTTTATCTAGGTAAAGTTGTGTATTACGAAAGCGGTTTATATAGGGTAAATTACGAAGATGGTGATTTTGAAGACTTAGAGAGTGTTGAAATTCGTCCGATACTTGTCAGGGACGATAATTTTGATGGTAGTTTAGTTAAGAGAAGAAATAAGTTGGATAAATTAGTGTTGCAGAATAGTGCTAAGGTTGCAAATGTGGCTGATAAGGGTTCACTGAAATCTCAAAAAGATGAACATGAACCTGCTGTTGGTGCGACTGATCCGTGTGAATCAAAAGGTGAAAATGATGAGGATGAAGACGACGGAGACGATGTGGATTTGTCGAGTGGCTCTGTTTCTAATGTTGAGACAGTGCCTTTGCCTCCGCCGTTGCATTTGCCGCCATCGTCCGGAACTATTGGTGTGCCTGAGCCGAGTGTCTCACATCTCCTATCTGTATATGGGTTTTTAAGATCGTTCAGCACCCGATTGTTTCTTCATCCATTTACTTTGGATGAATTTGTTGGTGCCCTGAATTATCAAGGGCCAAACACTTTGTTTGACGCAATTCATATTTCTCTGATGCGGGTGTTGAGGCGTCATCTTGAAAGCCTGTCGTCTGAGGGGTTTGAGCTTGCATCACAATGTCTTAGGTGCAACGATTGGAGCTTGCTCGATACGTTGACGTGGTCTGTTTTTGTGACCCTGTACTTGGTTGTTAATGGGTACACAAAAGGGCCCGAATGGAAAGGGTTCTATGATGAGGTTTTTACCAGTGAGTATTATTTGTTGCCTGTAAGTAGGAAGCTAATGATTCTGCAAATTCTTTGTGATGATGTTTTGGAATCTGAGGAGCTAAAAACTGAAATGAACACGCGAAAGGAATCAGAGGTCGGGATGGATGATGATGAAGAAGATATCCTTCCTGCAGAAACTGGCCCCAGAAAAGTCTATCCAAGATATACCAGGACCTCTTTTTGTGAGAATAAAGAAGCTGTGAAATTGGTTTCAGCGTCAAATGCTGGGAACCAACCTGGTAACTCTGTTTCAAATTGCAAAGATACAGAAAGCACTGGGGATGGAGATGTTGATAGAAATGGAGATGAGTGTCGCCTCTGCGGTATGGACGGAACCCTTATTTGTTGTGACGGTTGTCCCTCTGCTTATCATTCAAGGTGTATTGGTGTGATGAAAATGTTTATACCAGAAGGGCCATGGTATTGTCCCGAGTGCAAAATTGATATGGCTGGGCCTACAATTGCAAAGGGAACCTCACTTAGAGGGGCTGAAGTATTTGGGAAGGATTTGTATGGGCAGCTCTTCATGGGTACATGCGACCACTTACTTGTGCTTAACTTTGACAACAATGAAGTTTGTCTTAGATATTACAATCAGAAGGACATCCCTAAAGTTGTCCAAGTGCTTTATGAATCCATGGTGCACAGGCCAATGTACCATGGTATTTGCATGGCAGTGTTACAATACTGGAACATTTCCGAAAACTTCTTACCTCTTTGTGCTTCAACCGATACAAATTTAAAGGATGAGACAAAATTTTCTGCCCCTTTATGTCCTCCTTCAAGTGAAGACAACCATAAACCTGTTAGTTTGGTCAAGGTAGAGAACTCTCCAACCACTGCGACTGGTTCTGTTAGTCATCAGTCTGACATGAACTTTCAGAATTCTGTCAATATGTCAACTGCAGTAGATGCTGCTAAGTACTCTGTGGTAAACAGTCAATCAAGTAATTGTGGCCATGCAAATGATATGGAGTTGCCTTCGAATTTTTCTTTGCAAAACAAAGAAAACACCCAAGTAGGTTTTGGAAAGTGTGAACGCACTGCAACTGGTGATTTTTGTTACATGGGTTTCTCCTTTAAACCCATGTCGTACATAAATTACTATATGCATGGTGAATTTTCTGCATCAGCAGCTGCCAAATTTGCATCTGATTCTTCAGAGGAGTCTAAGCCAGAGGGTCATGCGTCAGACAGCCAGAAGAAGACAATATCTGCATACACTTATTTGCAAGCAAAATCATTCTCCCAAGTAGCTTCACGTTTCTTTTGGCCAAGTTCTGAAAAGAAGCTTGTGGATGTTCCAAGAGAGAGGTGTGGTTGGTGTTTTTCCTGTAAAGCCAATGTTGTTAGCAAGAGAGGGTGCATGTTAAATCAGTCTCTTATAATTGCCACAAAAAGTGCTATGAAAACCCTTGCTATATTACCTCCTTTAAGGAGTGGAGAGGGAGTTCTTCCTAGCACCATTGCAACTTACATTTTATATATGGAGAGATGTTTGCATGGTTTAGTCGTTGGGCCCTTCGTAAATGCAAGCTATAGAGAGAACTGGCGTGATCAAGTTAAACAAGCCATGACATTTAGTGCTATCAAGCCACTTCTACTTAAACTTGAGGAGAACATTCGAATCGTTGCTTTTTGTGGGGACTGGGTTAAGCTGACGGATGATCAGTTAGTTGAATTTTCCAATATCAGAAGTGCCACATCTACTCAAGGAACAACTCAGAAACGTGCACCAAGTGGGAGGCGTTCTAAAAAGAGGTCATCTAGTGATGAAGCTACAGATGATGGTTCCAAGGAAAGTATGTGGTGGCGCGGTGGAAGGTTTTCAAGATTTATATCTCAGAATATAACTGTGCCCAAATCGATGGTCCGAAAAGCAGCTCGCCAAGGTGGTTCGAGGAAAATTTCTGGTATTTTCTATGCTGATGACTCTGAAATTCCCAAAAGAAGTAGACAGCTTGTCTGGAGAGTTGCAGTTGAAATGAGTAGGAATGCCTCACAGCTGGCACTCCAGGTCAGATATCTAGATTTTTATCTTAGATGGAGTGATCTGATTCGTCCAGAGCAGAACACACAGGATGGGAAAGGTCAAGAGACTGAAGCTTCTGCTTTCCGAAATGCAAATATTTGTGACAAAAAACTTGTACAGGGAAAAATTTGTTACGGGATAATTTTTGGGAGCCAAAAGCATCTTCCTATTCGGGTGATGAAAAGTGCTGTTGAAACAGAGCAAGGGCCGGAAGGAAGAGAAAAGTATTGGTTTTTTGAAAATCGCATTCCTTTATATTTGGTAAAAGAATATGAAGAAGGTAATGAAAAGGCTCCATGTGAAGAGCACTATAGTGGTACATATCAGTTGCACAGAAGGCAGTTCAAATGTTCCTGCAATGACATATTCTTTTACCTCATTTGCAAGAGAGACAACTTGGCATACTCGTGTTCTTCATGTCAGATGGGCATTTCAATTCGGTATGCTCACAAGTGCAATGCATGTCAAGGTTATTGTCACAAGGACTGTTCGATAAGTTCAGTCTCTAGACTCTCTACAAAAGGGGGAGTTGAATGCTTGACAACATGCAAACAATGTCACTATGCCAAGTTACTTGCTCCAAACATAACTAGTGATGAATCTCCAACAAGTCCCTTAATCTTACAAGGACAGGAAAACAGCTCTGGGACTAGTTTTAAGGGAGCAAGGCCAAAGACCAGTCATTCTGATATGAAACAAGTTAACTCCAAGTCAGTTTCGAAAGGATCAAAGCGCAAATGTCAGGATCAAACTTTGACTTCTACCAGGAAAAAGAATGGTCATCCTGAGACAAAACTAGCCGAGTCTGATTCCACTTCGGCATCAATCAACCGTCGCAACAATAATTGTTCTTGGGGTGTTATTTGGAAAAAGAAAATGGACGAAGATAACTTTAATTTTGTGATCAAAAACATACTTTTTAAGGGAGCGTCAGACATACCTGATTCAGGACCTACTTGTCACTTGTGTGGAAAGGCATATAGGTCAGATCTAATGTATATTTGCTGCGAATCATGCCAAAATTGGTTTCATGCTGAAGCTGTTGAACTTGAAGAATCCCAAATTTCGTCCATGTTGGGCTTTAAATGTTGCAAGTGTCGCAGGATAAAATCACCTGTGTGTCCTTACTCTGATTCAAAACCTAAGTCAGAAGTTAAGAAACCACGCAAAAGAGCTGTAAAGAAAGAACATTCTGGAGCCAATTCTGATTCTGGACCATTTAATGATATGAGGGAGTGTGAACCTGCTACTCCTGTCTATCCTGTGGGAAATGATCATTTAACTTACTCTCTTGAACATGTTGAGCTGATTACAGAGCCTAATAAGTTAGATTCGGATGTCGAGTGGAACACTGTTTCTGTGCCAGGGCCTCGGAAATTACCAGTGAGAAGGCATGTTAAGAATGAAGGGGATGACGATGGTTCTGTTGCAGGAATTCCTTTACAAGCTGAATTCCCAACATACAGTGAAGCAAGTTATCTGTCCAATCCAGCAGATTCAATATTACCTTTAGAATACGACCCTGCTGCTTTTGACAGCAATCTGATGAATGATTTTGAAGACAATAACAATACCATCTTCGATGCAAATGAACTTCTGCGCTCAGATGATGACGGCCAGATTGGTGGAGTTGATTTGTCCGGGGAATTGTTGGAATATGATTTTGACAATTTTGACACTGCTAATCTTGAAGAATTTGGAGATGGTAGTTTTAGTTGTTGTGTATGTCTTCAAGGTGAACCAGGCCCTGATCTTTTTTGTGAGACTTGCGGGACTTTGATGCACAGCCATTGTTTGCCTCCTTGGCATGAACCAGTTTCTGATCCGGAACATTGGAGGTGTCTGACTTGCCGGGATTGGCAATAA 4842 0.4174 MEKGGGKPRGRPRKRRKEEEEKKDGKLVNEAKRQAVETKPIPLVGRYVLKEFPRNGVYLGKVVYYESGLYRVNYEDGDFEDLESVEIRPILVRDDNFDGSLVKRRNKLDKLVLQNSAKVANVADKGSLKSQKDEHEPAVGATDPCESKGENDEDEDDGDDVDLSSGSVSNVETVPLPPPLHLPPSSGTIGVPEPSVSHLLSVYGFLRSFSTRLFLHPFTLDEFVGALNYQGPNTLFDAIHISLMRVLRRHLESLSSEGFELASQCLRCNDWSLLDTLTWSVFVTLYLVVNGYTKGPEWKGFYDEVFTSEYYLLPVSRKLMILQILCDDVLESEELKTEMNTRKESEVGMDDDEEDILPAETGPRKVYPRYTRTSFCENKEAVKLVSASNAGNQPGNSVSNCKDTESTGDGDVDRNGDECRLCGMDGTLICCDGCPSAYHSRCIGVMKMFIPEGPWYCPECKIDMAGPTIAKGTSLRGAEVFGKDLYGQLFMGTCDHLLVLNFDNNEVCLRYYNQKDIPKVVQVLYESMVHRPMYHGICMAVLQYWNISENFLPLCASTDTNLKDETKFSAPLCPPSSEDNHKPVSLVKVENSPTTATGSVSHQSDMNFQNSVNMSTAVDAAKYSVVNSQSSNCGHANDMELPSNFSLQNKENTQVGFGKCERTATGDFCYMGFSFKPMSYINYYMHGEFSASAAAKFASDSSEESKPEGHASDSQKKTISAYTYLQAKSFSQVASRFFWPSSEKKLVDVPRERCGWCFSCKANVVSKRGCMLNQSLIIATKSAMKTLAILPPLRSGEGVLPSTIATYILYMERCLHGLVVGPFVNASYRENWRDQVKQAMTFSAIKPLLLKLEENIRIVAFCGDWVKLTDDQLVEFSNIRSATSTQGTTQKRAPSGRRSKKRSSSDEATDDGSKESMWWRGGRFSRFISQNITVPKSMVRKAARQGGSRKISGIFYADDSEIPKRSRQLVWRVAVEMSRNASQLALQVRYLDFYLRWSDLIRPEQNTQDGKGQETEASAFRNANICDKKLVQGKICYGIIFGSQKHLPIRVMKSAVETEQGPEGREKYWFFENRIPLYLVKEYEEGNEKAPCEEHYSGTYQLHRRQFKCSCNDIFFYLICKRDNLAYSCSSCQMGISIRYAHKCNACQGYCHKDCSISSVSRLSTKGGVECLTTCKQCHYAKLLAPNITSDESPTSPLILQGQENSSGTSFKGARPKTSHSDMKQVNSKSVSKGSKRKCQDQTLTSTRKKNGHPETKLAESDSTSASINRRNNNCSWGVIWKKKMDEDNFNFVIKNILFKGASDIPDSGPTCHLCGKAYRSDLMYICCESCQNWFHAEAVELEESQISSMLGFKCCKCRRIKSPVCPYSDSKPKSEVKKPRKRAVKKEHSGANSDSGPFNDMRECEPATPVYPVGNDHLTYSLEHVELITEPNKLDSDVEWNTVSVPGPRKLPVRRHVKNEGDDDGSVAGIPLQAEFPTYSEASYLSNPADSILPLEYDPAAFDSNLMNDFEDNNNTIFDANELLRSDDDGQIGGVDLSGELLEYDFDNFDTANLEEFGDGSFSCCVCLQGEPGPDLFCETCGTLMHSHCLPPWHEPVSDPEHWRCLTCRDWQ 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 388 405 - -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 123 177 - -
Mepo2g01760 1613 SUPERFAMILY FYVE/PHD zinc finger 407 466 IPR011011 -
Mepo2g01760 1613 Pfam PHD-finger 419 461 IPR019787 -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 1192 1268 - -
Mepo2g01760 1613 ProSitePatterns Zinc finger PHD-type signature. 419 460 IPR019786 -
Mepo2g01760 1613 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 297 340 IPR028942 -
Mepo2g01760 1613 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 410 465 IPR013083 -
Mepo2g01760 1613 Pfam DDT domain 195 250 IPR018501 -
Mepo2g01760 1613 ProSiteProfiles Zinc finger PHD-type profile. 416 463 IPR019787 -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 388 409 - -
Mepo2g01760 1613 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1306 1365 IPR013083 -
Mepo2g01760 1613 SUPERFAMILY FYVE/PHD zinc finger 1559 1611 IPR011011 -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 1368 1401 - -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 899 915 - -
Mepo2g01760 1613 SUPERFAMILY FYVE/PHD zinc finger 1304 1365 IPR011011 -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 1192 1241 - -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 1242 1257 - -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 1 32 - -
Mepo2g01760 1613 SMART PHD_3 1311 1359 IPR001965 -
Mepo2g01760 1613 SMART PHD_3 1564 1610 IPR001965 -
Mepo2g01760 1613 SMART PHD_3 418 461 IPR001965 -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 148 162 - -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 884 915 - -
Mepo2g01760 1613 CDD Tudor_AtPTM-like 44 91 IPR047365 -
Mepo2g01760 1613 MobiDBLite consensus disorder prediction 127 141 - -
Mepo2g01760 1613 PANTHER PHD FINGER FAMILY PROTEIN 38 1394 - -
Mepo2g01760 1613 SMART testlast3 193 253 IPR018501 -
Mepo2g01760 1613 ProSiteProfiles DDT domain profile. 193 253 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01760 Mepo-Chr2 25794238 25802843 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01760 21 1613 PHD Transcription Factor Family AT5G35210 40.931 0.0 1105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mepo2g01760 DDT 9.8e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01760 - - tpra:123920021 2308.49