Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01759 ATGAAGAGAGAACGATGGTTTCTTCTGACGCGACTCAGGGAAGTTGTGTATTACGAAAGTGGTTTGTACAGGGTTAATTACGAAAATGGTGATTTTGAAGATTTAGAGAGTGTTGAAATTCGTCCGATACTTGTCAGGGATGATGAATTTGATGGTGGTTTGGTGAATAGGACGAATAAGTTGGAGAAGATAGTGTTGCATATTGGTGCTATGGTTGCAAATATGGCTGACAAGGGTTCATTGAAATCTCAAAAAGATGAACCAGTTGTTGGTGCGACTGATTCGAGTGAATTGAATGGTGAAGATGACGGATTTGATGTTGATTTGTCGAGTGACTATGTTTCTGATGTTGAGATAGTGCCTTTGCCACCGACTTTGCAGTTATCGCCATCATCTGGAACTATTGATGTGCTTGAGCTGAGTGTCTTACATCTCCTATCAGTGTATGGATTTTTGAGATCATTCAGCACCCAATTGTTTCTTCGTCCATTTACTTTGGATGAATTTGTCGGTGCTCTGAATTATGAAGGGTCAAACACTCTATTTGACGCCATCATATTTCTTTGA 567 0.3986 MKRERWFLLTRLREVVYYESGLYRVNYENGDFEDLESVEIRPILVRDDEFDGGLVNRTNKLEKIVLHIGAMVANMADKGSLKSQKDEPVVGATDSSELNGEDDGFDVDLSSDYVSDVEIVPLPPTLQLSPSSGTIDVLELSVLHLLSVYGFLRSFSTQLFLRPFTLDEFVGALNYEGSNTLFDAIIFL 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01759 188 ProSiteProfiles DDT domain profile. 139 188 IPR018501 -
Mepo2g01759 188 Pfam DDT domain 142 187 IPR018501 -
Mepo2g01759 188 PANTHER PHD FINGER FAMILY PROTEIN 94 185 - -
Mepo2g01759 188 SMART testlast3 139 187 IPR018501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01759 Mepo-Chr2 25792684 25793760 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01759 12 185 PHD Transcription Factor Family AT5G35210 40.782 2.90e-24 97.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Mepo2g01759 DDT 6.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01759 - - tpra:123920021 210.69