Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01758 ATGGAGGATCAAAACCTAAACCTACCTTATACTCTTTCACCGTCTTCAACCCAAAATGAGTCAGAAACAACCAACAATGCTGCCAACGTGACGGAAGTTGTGGGAAATGATGCTGGTTCAGACACTGGAGCAAAGTCCAAATTTGGAGGTTCGGAATCTGCTCCGGTAAAAAGGGGCAGGGGGAGGCCTCGAAAGTATGAGGTTGGCGGGAACCCATTGTCTCCGATGACACCGACTCCAGGGCTTGCTATTCAGCCTTATGGAAGTGAGGAGAAGCGTGGAAGGGGACGTCCTCGTGGTTCTGGAAAATTGCAAATTTTGGCTTCCATTGGTGGATGTGTTGGAGAAACGGCTGGAGGAAGCATGTCACCTCATGTGCTGAATGTGAACCCTGGAGAGGATGTGGTTGGAAAGATATTTGCATTTTATCAAAAAGGTCCTTCTTCAGCTGTTTGCATTCTTTCTGCTACTGGCACTATATCAAGTGTAACCCTTCGTCAACCTGGTGTTTCTGATGGTTTTTTGACATACGAGGGTCACTTTGAGATTTTATCTTTAAGTGGATCATGCACCTTCACTAGTGGTGCTGCTGGTGGTGCACAAAGGAAAGTTGGCATGTTGAGTGTTTCATTGGCTAAACCTAATGGAGAGGTTTTTGGAGGTGGTGTTGAGAACACATTGATAGCTGCTACTCCTACTCAACTTATTTTGGCAACTTTCAAGCAAACCATAAGCAATCAAATCAAGAGAAAGCACTCATCAGTAGCTTCAACTGCTCCAAACATGCTGACTAATCAAGACTCAGCGAGAGAAAATAACTCGAAAGTTCCCAAGTTAACAACAGAAGGAGAACCTAGCTGCCTAACTGCAACAACAACAAATACTAATGGTGTATTAGTAGAAGATAATGTCACTATTGTTGCTGATGAAAATGTTCAATCCGATTCTATTGGTCGTAACGGTATCGATCTTGAAAGCCAGACACCAGAGCCTGTTTAA 999 0.4404 MEDQNLNLPYTLSPSSTQNESETTNNAANVTEVVGNDAGSDTGAKSKFGGSESAPVKRGRGRPRKYEVGGNPLSPMTPTPGLAIQPYGSEEKRGRGRPRGSGKLQILASIGGCVGETAGGSMSPHVLNVNPGEDVVGKIFAFYQKGPSSAVCILSATGTISSVTLRQPGVSDGFLTYEGHFEILSLSGSCTFTSGAAGGAQRKVGMLSVSLAKPNGEVFGGGVENTLIAATPTQLILATFKQTISNQIKRKHSSVASTAPNMLTNQDSARENNSKVPKLTTEGEPSCLTATTTNTNGVLVEDNVTIVADENVQSDSIGRNGIDLESQTPEPV 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01758 332 MobiDBLite consensus disorder prediction 1 101 - -
Mepo2g01758 332 ProSiteProfiles PPC domain profile profile. 119 261 IPR005175 -
Mepo2g01758 332 CDD DUF296 124 240 IPR005175 -
Mepo2g01758 332 MobiDBLite consensus disorder prediction 252 290 - -
Mepo2g01758 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 248 - -
Mepo2g01758 332 ProSitePatterns HMG-I and HMG-Y DNA-binding domain (A+T-hook). 54 65 IPR000637 GO:0006355
Mepo2g01758 332 Gene3D - 124 260 - -
Mepo2g01758 332 MobiDBLite consensus disorder prediction 1 36 - -
Mepo2g01758 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 24 281 IPR039605 GO:0003680
Mepo2g01758 332 Pfam AT hook motif 57 68 IPR017956 GO:0003677
Mepo2g01758 332 Pfam AT hook motif 92 102 IPR017956 GO:0003677
Mepo2g01758 332 SMART AT_hook_2 57 69 IPR017956 GO:0003677
Mepo2g01758 332 SMART AT_hook_2 92 104 IPR017956 GO:0003677
Mepo2g01758 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 241 IPR005175 -
Mepo2g01758 332 PRINTS AT-hook-like domain signature 90 101 IPR017956 GO:0003677
Mepo2g01758 332 PRINTS AT-hook-like domain signature 57 67 IPR017956 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01758 Mepo-Chr2 25759236 25763385 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01758 55 240 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 46.237 4.60e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01758 - - mtr:25492323 586.645