Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01757 ATGGAGGATCAAAACCTAAACCTATCCTATACGATTTCACCCTCTTCAACCCAAAACGAGTCAGAAACAACCAACAATGTTGCCATCGTGATGGAAGTTGTGAGAAATGATGTTGGTTCGGACACTGGAGCAAAGTCCAAATCTGGAGGTTCGGAATCTGCTCCGGTGAAAAGGGGCAGAGGGAGGCCTCGAAAGTATGAGGTTGGCGGGAACCCATTGTCTCTGGTGACACCGACACCAGGGCTTGCTATTCAGCCTTATGGAAGTGAGGAGAAGCGTGGAAGGGGACGTCCTCATGGTTCTGGAAAATTGCAAATTTTGGCTTCCATTGGTGGATGTGTTGGAGAAACGGCTGGAAGAAGCATGTCACCTCATGTGCTGATTGTGAAACCTGGAGAGGATGTGGTTGGAAAGATATTTGCATTTTATCAAAAAGGTCCTTCTTCAGCTGTTTGCATTCTTTCTGCTACTGGCACTATATCAAGTGTCACCCTTCGCCAACCTGGTGTTTCTGATGGTTTTCTAAGACACGAGGGTCACTTTGAGATTTTATCTTTAAGTGGATCATGCACCTTCACTAGTGGTGCTGCTGGTGGTGCACAAAGGAAAGTTGGCATGTTGAGTGTTTCATTGGCTAAACCTAATGGAGAGGTTTTTGGAGGTGGTGTTGAGAACACATTGATAGCTGCTACTCCTACTCAACTTATTTTGGCAACTTTCAAGCAAACCATAAGCAATCAAATCAAGAGAAAGCACTCATCAGCAGCTTCAACTGCTCCAAAGATGCTGATTAATCAAGATTCAGCGAGAGAAAATAACTCGAAAGTTCCCAAGTTAACAACAGAAGGAGAACCTAGCTGCCTAACTGCAACAACAACAAATACTAATGGTGTATTAGTAGAAGATAATGTCACTATTGTTGCTGATGAAAATGTTCAATCCGATTCTATTGGTCGTAACGGTATCGATCTTGAAAGCCAGACACCGGAGCCTGTTAAAAGATCTCCAGATTTTGATGCCAACCATGTTCCTGAAATATGA 1041 0.4371 MEDQNLNLSYTISPSSTQNESETTNNVAIVMEVVRNDVGSDTGAKSKSGGSESAPVKRGRGRPRKYEVGGNPLSLVTPTPGLAIQPYGSEEKRGRGRPHGSGKLQILASIGGCVGETAGRSMSPHVLIVKPGEDVVGKIFAFYQKGPSSAVCILSATGTISSVTLRQPGVSDGFLRHEGHFEILSLSGSCTFTSGAAGGAQRKVGMLSVSLAKPNGEVFGGGVENTLIAATPTQLILATFKQTISNQIKRKHSSAASTAPKMLINQDSARENNSKVPKLTTEGEPSCLTATTTNTNGVLVEDNVTIVADENVQSDSIGRNGIDLESQTPEPVKRSPDFDANHVPEI 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01757 346 Gene3D - 124 262 - -
Mepo2g01757 346 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 289 IPR039605 GO:0003680
Mepo2g01757 346 CDD DUF296 124 240 IPR005175 -
Mepo2g01757 346 MobiDBLite consensus disorder prediction 39 101 - -
Mepo2g01757 346 PRINTS AT-hook-like domain signature 57 67 IPR017956 GO:0003677
Mepo2g01757 346 PRINTS AT-hook-like domain signature 90 101 IPR017956 GO:0003677
Mepo2g01757 346 MobiDBLite consensus disorder prediction 251 288 - -
Mepo2g01757 346 SMART AT_hook_2 92 104 IPR017956 GO:0003677
Mepo2g01757 346 SMART AT_hook_2 57 69 IPR017956 GO:0003677
Mepo2g01757 346 Pfam Plants and Prokaryotes Conserved (PCC) domain 124 241 IPR005175 -
Mepo2g01757 346 MobiDBLite consensus disorder prediction 311 346 - -
Mepo2g01757 346 ProSiteProfiles PPC domain profile profile. 119 261 IPR005175 -
Mepo2g01757 346 ProSitePatterns HMG-I and HMG-Y DNA-binding domain (A+T-hook). 54 65 IPR000637 GO:0006355
Mepo2g01757 346 SUPERFAMILY AF0104/ALDC/Ptd012-like 120 248 - -
Mepo2g01757 346 MobiDBLite consensus disorder prediction 1 25 - -
Mepo2g01757 346 MobiDBLite consensus disorder prediction 330 346 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01757 Mepo-Chr2 25746791 25750816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01757 55 240 AT-hook Motif Nuclear Localized (AHL) Family AT2G45850 45.699 1.12e-43 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01757 - - mtr:25492323 587.03