Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo2g01756 ATGGAGGATCAAAATGTGAACCTAGAACTTACACTGTCACTGAATTCATCCCAAAACCGGTCAAAAACTACCAACCATGCCATCACCGAGATGGAAGTTGTTGGAGTTGATGCTGGTTTGGACACCGTAGCAAAGTCTGGACCTGGAGGTTCAAACTCTGCTCTGGTGATGAAAAAGGGGAGAGGGAGGCCTCGAAAATCTGAGGTTGGCGAGAACCCACTGTCCCCTGCTAAGCTGCCACCGAGGATTTCCATTCAGCCTAGTGGAAGTGAGGAGAAGCGTGGAAGGGGACGTCCTCGTGGTTCTGGAAAAATGCAGATTTTGGCTCCCATTGAAACAGACGGAGGAAACATGACACCTTATCTGCTAATTGTGAACCCTAGAGAGGATGTGGTTAGAAAGTTATTTGCATTTTTGGAGAAAGTTCCTCAAGAAGATGTTTGCATACTTTCTGCTTGTGGAACTGTATCAAGTCTCACCCTTTGCCAACCTGATGTTTCTAATGGTTTTTCAAGACATGAGGGTCACTTTGATATTTTATCTTTAAGTGGACCATGCACCTTCACTGGTGGTGCTGCTGGTGGTTCACAAAGGAAAATTGGCATGCTGAGTGTTTCATTGGCTCAACCTGATGGCAAGGTTTTTGGAGGTCGTGTTGAGAACTTATTGATAGCTGCTACTCCTATTAAGATAATTTTGGCAACTTGCAAGAAAAACATAAGCAAGAGAAAGTACGCATCTACAACTTCAACCGCTCCAAACATGGTGACTAATCAAGAAGCCATAAGGGATAATAACTTGAAATGTCCTAAGTTAACTATTGAAGGAGAACCTAGCTGCTCAATGCATTCCTGA 855 0.4398 MEDQNVNLELTLSLNSSQNRSKTTNHAITEMEVVGVDAGLDTVAKSGPGGSNSALVMKKGRGRPRKSEVGENPLSPAKLPPRISIQPSGSEEKRGRGRPRGSGKMQILAPIETDGGNMTPYLLIVNPREDVVRKLFAFLEKVPQEDVCILSACGTVSSLTLCQPDVSNGFSRHEGHFDILSLSGPCTFTGGAAGGSQRKIGMLSVSLAQPDGKVFGGRVENLLIAATPIKIILATCKKNISKRKYASTTSTAPNMVTNQEAIRDNNLKCPKLTIEGEPSCSMHS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo2g01756 284 Pfam Plants and Prokaryotes Conserved (PCC) domain 120 236 IPR005175 -
Mepo2g01756 284 CDD DUF296 119 227 IPR005175 -
Mepo2g01756 284 PRINTS AT-hook-like domain signature 91 102 IPR017956 GO:0003677
Mepo2g01756 284 PRINTS AT-hook-like domain signature 58 68 IPR017956 GO:0003677
Mepo2g01756 284 ProSiteProfiles PPC domain profile profile. 115 259 IPR005175 -
Mepo2g01756 284 SMART AT_hook_2 58 70 IPR017956 GO:0003677
Mepo2g01756 284 SMART AT_hook_2 93 105 IPR017956 GO:0003677
Mepo2g01756 284 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 32 258 IPR039605 GO:0003680
Mepo2g01756 284 MobiDBLite consensus disorder prediction 43 104 - -
Mepo2g01756 284 SUPERFAMILY AF0104/ALDC/Ptd012-like 116 251 - -
Mepo2g01756 284 Gene3D - 120 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo2g01756 Mepo-Chr2 25726271 25731244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo2g01756 56 235 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 39.604 3.34e-34 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo2g01756 - - mtr:25492318 469.929